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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
Name | Primer Sequence | Tm | CFD Score |
---|---|---|---|
ontarget_mm0__chr7 5.53 Mbp_chr7_5529726_F | TCGTCGGCAGCGTCTGGTGAGCTGCGAGAATAGC | 60.1 | 1.00 |
ontarget_mm0__chr7 5.53 Mbp_chr7_5529726_R | GTCTCGTGGGCTCGGCGGCTTCCTTTGTCCCCAAT | 60.6 | 1.00 |
mm4__chr1 43.94 Mbp_chr1_43943502_F | Primer3: not found at this Tm | N.d. | 0.53 |
mm4__chr1 43.94 Mbp_chr1_43943502_R | Primer3: not found at this Tm | N.d. | 0.53 |
mm4__chr20 62.96 Mbp_chr20_62963019_F | TCGTCGGCAGCGTCCTAGGGCTAAGGCAGACACC | 59.5 | 0.39 |
mm4__chr20 62.96 Mbp_chr20_62963019_R | GTCTCGTGGGCTCGGCACCTTTGAGAACCGCGTTC | 59.7 | 0.39 |
mm4__chrX 18.88 Mbp_chrX_18879194_F | TCGTCGGCAGCGTCTTTCACCAGCTCTCTGTGGC | 60.2 | 0.31 |
mm4__chrX 18.88 Mbp_chrX_18879194_R | GTCTCGTGGGCTCGGGGAATTCACAGGTGGCAGGA | 59.9 | 0.31 |
mm4__chr17 81.73 Mbp_chr17_81727274_F | Primer3: not found at this Tm | N.d. | 0.31 |
mm4__chr17 81.73 Mbp_chr17_81727274_R | Primer3: not found at this Tm | N.d. | 0.31 |
mm4__chr10 48.90 Mbp_chr10_48898354_F | TCGTCGGCAGCGTCACCCCAAGCTCAGCAATAGC | 60.3 | 0.30 |
mm4__chr10 48.90 Mbp_chr10_48898354_R | GTCTCGTGGGCTCGGGTGGTCCCTAGGATCCCCTT | 60.0 | 0.30 |
mm4__chr8 41.70 Mbp_chr8_41701860_F | TCGTCGGCAGCGTCCTTCCCATCTCCCCAAACCC | 60.0 | 0.26 |
mm4__chr8 41.70 Mbp_chr8_41701860_R | GTCTCGTGGGCTCGGGGAGCTTGTCCTCCTTCCAG | 59.7 | 0.26 |
mm4__chr10 126.82 Mbp_chr10_126824022_F | Primer3: not found at this Tm | N.d. | 0.26 |
mm4__chr10 126.82 Mbp_chr10_126824022_R | Primer3: not found at this Tm | N.d. | 0.26 |
mm4__chr5 7.82 Mbp_chr5_7816421_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4__chr5 7.82 Mbp_chr5_7816421_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4__chr17 18.85 Mbp_chr17_18850909_F | TCGTCGGCAGCGTCCAGGAAGCAAAGCCACCAAG | 59.6 | 0.24 |
mm4__chr17 18.85 Mbp_chr17_18850909_R | GTCTCGTGGGCTCGGCCTATGCCACTGTCCTGCAA | 60.0 | 0.24 |
mm4__chr1 156.60 Mbp_chr1_156595898_F | TCGTCGGCAGCGTCAGGGTCCAAGTCAAAGCGAG | 59.9 | 0.24 |
mm4__chr1 156.60 Mbp_chr1_156595898_R | GTCTCGTGGGCTCGGGAAGATAGGCAGCTCCCCAC | 59.8 | 0.24 |
mm4__chr20 62.33 Mbp_chr20_62328812_F | TCGTCGGCAGCGTCCTCTGGCACCAACTCCCTG | 60.0 | 0.23 |
mm4__chr20 62.33 Mbp_chr20_62328812_R | GTCTCGTGGGCTCGGCTGCCATGCCCATGTCATTG | 59.8 | 0.23 |
mm4__chr2 43.33 Mbp_chr2_43330777_F | TCGTCGGCAGCGTCGGCAAGAAGGTCTGGAGCAT | 60.0 | 0.22 |
mm4__chr2 43.33 Mbp_chr2_43330777_R | GTCTCGTGGGCTCGGCCTGCTTTCTTCCTCTCCCG | 60.1 | 0.22 |
mm4__chr1 155.21 Mbp_chr1_155207412_F | TCGTCGGCAGCGTCTCCAGCTACCTCTCCCACAT | 59.6 | 0.21 |
mm4__chr1 155.21 Mbp_chr1_155207412_R | GTCTCGTGGGCTCGGGTACTGTAGGTCCCTGGGCT | 60.3 | 0.21 |
mm4__chr3 51.70 Mbp_chr3_51698892_F | TCGTCGGCAGCGTCTGGTGTTTAGCTGGCCTTGA | 59.5 | 0.20 |
mm4__chr3 51.70 Mbp_chr3_51698892_R | GTCTCGTGGGCTCGGCTCCTCTCCACCCTGGACAA | 60.5 | 0.20 |
mm4__chr9 91.07 Mbp_chr9_91072327_F | TCGTCGGCAGCGTCAGGCAGTCAGAGGACAAACG | 59.9 | 0.18 |
mm4__chr9 91.07 Mbp_chr9_91072327_R | GTCTCGTGGGCTCGGTACTCAGCCAAATGCCAGCC | 60.6 | 0.18 |
mm4__chr9 133.46 Mbp_chr9_133460900_F | TCGTCGGCAGCGTCCACGCATCCCAGTCACAGA | 59.7 | 0.18 |
mm4__chr9 133.46 Mbp_chr9_133460900_R | GTCTCGTGGGCTCGGACGGCTTCCATTCACTCCTG | 60.0 | 0.18 |
mm4__chr14 28.68 Mbp_chr14_28684038_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4__chr14 28.68 Mbp_chr14_28684038_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm3__chr19 5.88 Mbp_chr19_5876669_F | TCGTCGGCAGCGTCGCTGGGTGGGTGATAAAGCT | 60.0 | 0.17 |
mm3__chr19 5.88 Mbp_chr19_5876669_R | GTCTCGTGGGCTCGGGCCTTCTCCCTCCTCCTGA | 59.9 | 0.17 |
mm4__chr1 119.57 Mbp_chr1_119570822_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4__chr1 119.57 Mbp_chr1_119570822_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4__chr2 33.71 Mbp_chr2_33708531_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4__chr2 33.71 Mbp_chr2_33708531_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4__chr18 59.94 Mbp_chr18_59938530_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4__chr18 59.94 Mbp_chr18_59938530_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm3__chr7 2.61 Mbp_chr7_2607987_F | TCGTCGGCAGCGTCGGCAGCCTTAAGACCCTGTT | 59.9 | 0.15 |
mm3__chr7 2.61 Mbp_chr7_2607987_R | GTCTCGTGGGCTCGGTCTCCTCCTTCCCTGACTCC | 59.6 | 0.15 |
mm4__chr1 52.84 Mbp_chr1_52838333_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm4__chr1 52.84 Mbp_chr1_52838333_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm4__chr8 142.36 Mbp_chr8_142363478_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm4__chr8 142.36 Mbp_chr8_142363478_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm4__chr22 18.04 Mbp_chr22_18044207_F | TCGTCGGCAGCGTCGCTGCTGATGGAGGCTACAA | 60.1 | 0.14 |
mm4__chr22 18.04 Mbp_chr22_18044207_R | GTCTCGTGGGCTCGGGAGTTTCAGAAGCCAGCCCT | 59.9 | 0.14 |
mm4__chr12 48.08 Mbp_chr12_48080987_F | TCGTCGGCAGCGTCCTCCACTGACCCAACCTGTG | 60.2 | 0.14 |
mm4__chr12 48.08 Mbp_chr12_48080987_R | GTCTCGTGGGCTCGGGGACCACTCAGCCTTCCTTC | 60.0 | 0.14 |
mm4__chr9 128.92 Mbp_chr9_128916409_F | TCGTCGGCAGCGTCCTGTGGAGGGCTGACAAGG | 60.0 | 0.14 |
mm4__chr9 128.92 Mbp_chr9_128916409_R | GTCTCGTGGGCTCGGTTCTGGGAGAAGCTAGGCCT | 59.9 | 0.14 |
mm4__chr15 25.01 Mbp_chr15_25013568_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4__chr15 25.01 Mbp_chr15_25013568_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4__chr11 69.92 Mbp_chr11_69916092_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4__chr11 69.92 Mbp_chr11_69916092_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4__chr21 25.90 Mbp_chr21_25898811_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4__chr21 25.90 Mbp_chr21_25898811_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4__chr1 87.61 Mbp_chr1_87613196_F | TCGTCGGCAGCGTCTGTCCTCCAAATTGCCACCT | 59.5 | 0.11 |
mm4__chr1 87.61 Mbp_chr1_87613196_R | GTCTCGTGGGCTCGGAGTCATGTGATCTTGCTGCCA | 59.9 | 0.11 |
mm4__chr17 73.03 Mbp_chr17_73032966_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4__chr17 73.03 Mbp_chr17_73032966_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4__chr11 120.80 Mbp_chr11_120799117_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4__chr11 120.80 Mbp_chr11_120799117_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4__chr17 49.49 Mbp_chr17_49487072_F | TCGTCGGCAGCGTCCTGCTGCTCTCTCTGGCAG | 60.1 | 0.11 |
mm4__chr17 49.49 Mbp_chr17_49487072_R | GTCTCGTGGGCTCGGTGGGCTGAAAATCGAGGCAA | 60.2 | 0.11 |
mm3__chr6 168.07 Mbp_chr6_168073381_F | TCGTCGGCAGCGTCGAGTCTGACACAGGAAGCCC | 60.0 | 0.10 |
mm3__chr6 168.07 Mbp_chr6_168073381_R | GTCTCGTGGGCTCGGGGCCAGCCTTTCTGATGTGA | 60.3 | 0.10 |
mm4__chr1 1.04 Mbp_chr1_1037018_F | TCGTCGGCAGCGTCGCTTGTCCTGGAAGACCCTC | 60.0 | 0.09 |
mm4__chr1 1.04 Mbp_chr1_1037018_R | GTCTCGTGGGCTCGGGCAAGACTCGGGTCCTTCTC | 60.1 | 0.09 |
mm4__chr3 127.20 Mbp_chr3_127195686_F | TCGTCGGCAGCGTCTCTTCCATTCCATGCTGCCC | 60.3 | 0.09 |
mm4__chr3 127.20 Mbp_chr3_127195686_R | GTCTCGTGGGCTCGGAGAGAGACGGTGGAGAGGTC | 60.0 | 0.09 |
mm4__chr10 61.98 Mbp_chr10_61979634_F | TCGTCGGCAGCGTCTCCAAATGTCCTTCCCCAGC | 59.9 | 0.09 |
mm4__chr10 61.98 Mbp_chr10_61979634_R | GTCTCGTGGGCTCGGCAGACCTGGATAGAGGGTAGA | 57.1 | 0.09 |
mm3__chr15 40.95 Mbp_chr15_40952429_F | TCGTCGGCAGCGTCTTCAGCTGCCTCTGTTTCCC | 60.2 | 0.09 |
mm3__chr15 40.95 Mbp_chr15_40952429_R | GTCTCGTGGGCTCGGGTCTTCTCCCTCGGCTTCTG | 59.8 | 0.09 |
mm4__chr11 80.24 Mbp_chr11_80244079_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4__chr11 80.24 Mbp_chr11_80244079_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4__chr20 17.93 Mbp_chr20_17929848_F | TCGTCGGCAGCGTCCATCCCCAACTATCAGCCCG | 60.2 | 0.08 |
mm4__chr20 17.93 Mbp_chr20_17929848_R | GTCTCGTGGGCTCGGATACTGGCTCACACACTGGC | 60.0 | 0.08 |
mm4__chr6 125.96 Mbp_chr6_125956946_F | TCGTCGGCAGCGTCGGCGACGTCTCGAGGTAAAA | 60.1 | 0.08 |
mm4__chr6 125.96 Mbp_chr6_125956946_R | GTCTCGTGGGCTCGGCGCTGCGGTTCACCTGTT | 60.9 | 0.08 |
mm4__chr7 151.14 Mbp_chr7_151137344_F | TCGTCGGCAGCGTCCCACTAACCTCCAGCACCTG | 60.0 | 0.08 |
mm4__chr7 151.14 Mbp_chr7_151137344_R | GTCTCGTGGGCTCGGCACCCAACACTGAGACCACA | 59.8 | 0.08 |
mm4__chr6 43.17 Mbp_chr6_43170524_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4__chr6 43.17 Mbp_chr6_43170524_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4__chr17 81.17 Mbp_chr17_81165776_F | TCGTCGGCAGCGTCGAGGCCGGTTTGTGCTGG | 61.3 | 0.07 |
mm4__chr17 81.17 Mbp_chr17_81165776_R | GTCTCGTGGGCTCGGAATTAACCCTTTCCCCGCCC | 60.3 | 0.07 |
mm4__chr7 129.16 Mbp_chr7_129160488_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4__chr7 129.16 Mbp_chr7_129160488_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4__chr9 30.56 Mbp_chr9_30558436_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4__chr9 30.56 Mbp_chr9_30558436_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4__chr10 78.78 Mbp_chr10_78779999_F | TCGTCGGCAGCGTCAGATGAGGGTGTCAGGGTCA | 59.8 | 0.07 |
mm4__chr10 78.78 Mbp_chr10_78779999_R | GTCTCGTGGGCTCGGTATGTTCCCGTGTGCTGTCC | 60.0 | 0.07 |
mm4__chr4 186.34 Mbp_chr4_186339450_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4__chr4 186.34 Mbp_chr4_186339450_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm3__chr4 71.71 Mbp_chr4_71714482_F | TCGTCGGCAGCGTCACCTAGCAACTTTAGGAGCACT | 59.0 | 0.06 |
mm3__chr4 71.71 Mbp_chr4_71714482_R | GTCTCGTGGGCTCGGTGTTGACTCAATAAGGGGATAGCT | 59.2 | 0.06 |
mm3__chr15 83.65 Mbp_chr15_83654414_F | TCGTCGGCAGCGTCGTCTCCAAGCAGAGTCGGG | 59.7 | 0.06 |
mm3__chr15 83.65 Mbp_chr15_83654414_R | GTCTCGTGGGCTCGGGACTCTCCCTGAACCTTCCG | 59.4 | 0.06 |
mm4__chr1 24.10 Mbp_chr1_24101897_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4__chr1 24.10 Mbp_chr1_24101897_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4__chr16 35.03 Mbp_chr16_35027206_F | TCGTCGGCAGCGTCAAGGAGAGTGAGGGGACTGC | 60.9 | 0.06 |
mm4__chr16 35.03 Mbp_chr16_35027206_R | GTCTCGTGGGCTCGGGGCATGGTAAGCCCCTAGTG | 60.1 | 0.06 |
mm4__chr16 34.38 Mbp_chr16_34384599_F | TCGTCGGCAGCGTCGGCATGGTAAGCCCCTAGTG | 60.1 | 0.06 |
mm4__chr16 34.38 Mbp_chr16_34384599_R | GTCTCGTGGGCTCGGAAGGAGAGTGAGGGGACTGC | 60.9 | 0.06 |
mm4__chr19 4.05 Mbp_chr19_4052799_F | TCGTCGGCAGCGTCGACCGAATTGCAAACTGCCC | 60.3 | 0.06 |
mm4__chr19 4.05 Mbp_chr19_4052799_R | GTCTCGTGGGCTCGGAGCTTGAGAGATCACTGTGCC | 60.0 | 0.06 |
mm4__chr1 81.44 Mbp_chr1_81440280_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr1 81.44 Mbp_chr1_81440280_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr19 19.63 Mbp_chr19_19627184_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr19 19.63 Mbp_chr19_19627184_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm3__chr17 63.70 Mbp_chr17_63700684_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm3__chr17 63.70 Mbp_chr17_63700684_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr8 131.04 Mbp_chr8_131043391_F | TCGTCGGCAGCGTCTGGCAATGGAAGGCATCACT | 59.9 | 0.05 |
mm4__chr8 131.04 Mbp_chr8_131043391_R | GTCTCGTGGGCTCGGCTGCATCCAGCCCCTCATTT | 60.3 | 0.05 |
mm4__chr9 127.46 Mbp_chr9_127460417_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr9 127.46 Mbp_chr9_127460417_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr1 34.91 Mbp_chr1_34913068_F | TCGTCGGCAGCGTCGTTGGGCTGGTGTCCTAGTC | 60.0 | 0.05 |
mm4__chr1 34.91 Mbp_chr1_34913068_R | GTCTCGTGGGCTCGGGCAGTGAGGGGAAAAGGAGG | 60.3 | 0.05 |
mm4__chr5 131.34 Mbp_chr5_131341489_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr5 131.34 Mbp_chr5_131341489_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4__chr6 7.72 Mbp_chr6_7723333_F | TCGTCGGCAGCGTCATCTGCTCCTGTCCCTCCAA | 60.2 | 0.05 |
mm4__chr6 7.72 Mbp_chr6_7723333_R | GTCTCGTGGGCTCGGCATTAGACAGCCCGAGTGCT | 59.8 | 0.05 |
mm4__chr12 19.69 Mbp_chr12_19688055_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr12 19.69 Mbp_chr12_19688055_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr4 186.57 Mbp_chr4_186574210_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr4 186.57 Mbp_chr4_186574210_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr1 7.12 Mbp_chr1_7123874_F | TCGTCGGCAGCGTCCCATTCACTGCCAAGTCCCT | 59.9 | 0.04 |
mm4__chr1 7.12 Mbp_chr1_7123874_R | GTCTCGTGGGCTCGGCCCCATGAGACACTTTCCCC | 60.0 | 0.04 |
mm4__chr2 129.67 Mbp_chr2_129669480_F | TCGTCGGCAGCGTCCAAGGAACCCGCATGAGCTA | 60.1 | 0.04 |
mm4__chr2 129.67 Mbp_chr2_129669480_R | GTCTCGTGGGCTCGGGATGATGGGGCAGCCACTG | 60.8 | 0.04 |
mm4__chr5 127.23 Mbp_chr5_127229754_F | TCGTCGGCAGCGTCTCAAGTGGCTTCCTCCCTCA | 60.4 | 0.04 |
mm4__chr5 127.23 Mbp_chr5_127229754_R | GTCTCGTGGGCTCGGCTCCCCTCGCTCCACCTC | 61.1 | 0.04 |
mm4__chrX 89.58 Mbp_chrX_89584304_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chrX 89.58 Mbp_chrX_89584304_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr7 138.56 Mbp_chr7_138563159_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr7 138.56 Mbp_chr7_138563159_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr7 120.06 Mbp_chr7_120059051_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr7 120.06 Mbp_chr7_120059051_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr6 109.89 Mbp_chr6_109891846_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr6 109.89 Mbp_chr6_109891846_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr1 4.90 Mbp_chr1_4896883_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr1 4.90 Mbp_chr1_4896883_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4__chr10 133.22 Mbp_chr10_133218508_F | TCGTCGGCAGCGTCCATCTGCCTGTGGACACGAC | 61.0 | 0.03 |
mm4__chr10 133.22 Mbp_chr10_133218508_R | GTCTCGTGGGCTCGGGCAAGATTGTGCCTGGATGC | 60.1 | 0.03 |
mm4__chr5 24.49 Mbp_chr5_24491615_F | TCGTCGGCAGCGTCGAGGAGGATGGCGATCAAGG | 59.9 | 0.03 |
mm4__chr5 24.49 Mbp_chr5_24491615_R | GTCTCGTGGGCTCGGGTGTGCTTGTGACAGCCAAG | 59.9 | 0.03 |
mm4__chr11 65.00 Mbp_chr11_64996966_F | TCGTCGGCAGCGTCACAGAGGTGCATGGCTTAGG | 59.7 | 0.03 |
mm4__chr11 65.00 Mbp_chr11_64996966_R | GTCTCGTGGGCTCGGACTGAAACTTGGCCCTCTGG | 59.8 | 0.03 |
mm4__chr9 18.36 Mbp_chr9_18356349_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4__chr9 18.36 Mbp_chr9_18356349_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4__chr14 96.48 Mbp_chr14_96479831_F | TCGTCGGCAGCGTCTCCTCCTATGGGCTTGGTGA | 59.9 | 0.03 |
mm4__chr14 96.48 Mbp_chr14_96479831_R | GTCTCGTGGGCTCGGCAAATGCTGTCCCATTGGGC | 60.1 | 0.03 |
mm4__chr14 99.59 Mbp_chr14_99586877_F | TCGTCGGCAGCGTCGCCCTACCTATAGCACACCC | 59.3 | 0.03 |
mm4__chr14 99.59 Mbp_chr14_99586877_R | GTCTCGTGGGCTCGGCAGGTCCCCGGTAGGAGG | 60.4 | 0.03 |
mm4__chr12 52.91 Mbp_chr12_52907621_F | TCGTCGGCAGCGTCCAGTATGCAGGCTGGAGGG | 59.8 | 0.03 |
mm4__chr12 52.91 Mbp_chr12_52907621_R | GTCTCGTGGGCTCGGTGGGGTCTCTGGGCAATAGA | 59.9 | 0.03 |
mm4__chr4 76.42 Mbp_chr4_76421360_F | TCGTCGGCAGCGTCCATCCGAGCGTCGAAGTCC | 60.5 | 0.02 |
mm4__chr4 76.42 Mbp_chr4_76421360_R | GTCTCGTGGGCTCGGCAGGGTAGTTTCTGGGGCAG | 60.0 | 0.02 |
mm4__chr19 344.33 Kbp_chr19_344333_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4__chr19 344.33 Kbp_chr19_344333_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4__chr3 14.54 Mbp_chr3_14544540_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4__chr3 14.54 Mbp_chr3_14544540_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4__chr17 47.70 Mbp_chr17_47700811_F | TCGTCGGCAGCGTCCAAGAAAGGGGCAGCAGAGA | 59.9 | 0.02 |
mm4__chr17 47.70 Mbp_chr17_47700811_R | GTCTCGTGGGCTCGGGAAAGGCACCAGGTTCCACT | 60.1 | 0.02 |
mm4__chr5 137.03 Mbp_chr5_137033153_F | TCGTCGGCAGCGTCTCAGCTCGGCTATGATGCAG | 59.9 | 0.02 |
mm4__chr5 137.03 Mbp_chr5_137033153_R | GTCTCGTGGGCTCGGAGTCTCCTCTTGCAGATCGC | 59.5 | 0.02 |
mm4__chr14 90.61 Mbp_chr14_90613709_F | TCGTCGGCAGCGTCATAGCCCAGTCACCTCACCT | 59.9 | 0.02 |
mm4__chr14 90.61 Mbp_chr14_90613709_R | GTCTCGTGGGCTCGGCTGGGGTCCTTCCAGTTTCC | 59.9 | 0.02 |
mm4__chr8 51.41 Mbp_chr8_51408556_F | TCGTCGGCAGCGTCCTCGGTAACCCCTCAGCATC | 59.8 | 0.02 |
mm4__chr8 51.41 Mbp_chr8_51408556_R | GTCTCGTGGGCTCGGACGGTTTACCAGGAAGCCAG | 59.9 | 0.02 |
mm4__chr19 14.56 Mbp_chr19_14558954_F | TCGTCGGCAGCGTCCTGTTCAGCAGCTGCCTGTA | 60.3 | 0.02 |
mm4__chr19 14.56 Mbp_chr19_14558954_R | GTCTCGTGGGCTCGGCCACCCCAATCTCTGCTCTG | 60.1 | 0.02 |
mm4__chr4 143.34 Mbp_chr4_143337396_F | TCGTCGGCAGCGTCCGGGGCTGGTTCTTAAACGA | 60.3 | 0.02 |
mm4__chr4 143.34 Mbp_chr4_143337396_R | GTCTCGTGGGCTCGGAGAAAGTTGTCCGGCCAAGT | 59.8 | 0.02 |
mm4__chr8 142.15 Mbp_chr8_142146752_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4__chr8 142.15 Mbp_chr8_142146752_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4__chr10 1.51 Mbp_chr10_1514593_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4__chr10 1.51 Mbp_chr10_1514593_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4__chr2 96.89 Mbp_chr2_96891703_F | TCGTCGGCAGCGTCCACCAACAGCAGCTCTCTCA | 59.9 | 0.01 |
mm4__chr2 96.89 Mbp_chr2_96891703_R | GTCTCGTGGGCTCGGAAACACTTCTGCCCAGCTCC | 60.5 | 0.01 |
mm4__chr1 205.27 Mbp_chr1_205268871_F | TCGTCGGCAGCGTCACTGCTCTTGTGGTGGTTGT | 59.7 | 0.01 |
mm4__chr1 205.27 Mbp_chr1_205268871_R | GTCTCGTGGGCTCGGGGCAGAGGAAGCATGGGTAA | 59.7 | 0.01 |
mm4__chr14 24.16 Mbp_chr14_24161667_F | TCGTCGGCAGCGTCCCAGCCTCAGTGGACCATTT | 59.9 | 0.01 |
mm4__chr14 24.16 Mbp_chr14_24161667_R | GTCTCGTGGGCTCGGACAGCCTACACAACCTAGCC | 59.3 | 0.01 |
mm4__chr2 3.29 Mbp_chr2_3291936_F | TCGTCGGCAGCGTCGGATGCTGTCAGCCCCAAG | 60.7 | 0.01 |
mm4__chr2 3.29 Mbp_chr2_3291936_R | GTCTCGTGGGCTCGGGTGGACATAGGCTGCCATGT | 60.1 | 0.01 |
mm4__chr4 8.47 Mbp_chr4_8473258_F | TCGTCGGCAGCGTCCCTGAGCATGACCCATGAGG | 60.1 | 0.01 |
mm4__chr4 8.47 Mbp_chr4_8473258_R | GTCTCGTGGGCTCGGCCATACCAGCCAGCATGGAT | 59.8 | 0.01 |
mm4__chr3 193.81 Mbp_chr3_193813153_F | TCGTCGGCAGCGTCACTGCAGTGCTCTGATGAGG | 59.7 | 0.01 |
mm4__chr3 193.81 Mbp_chr3_193813153_R | GTCTCGTGGGCTCGGTCATTGGAAGTAGTGCCCCA | 58.6 | 0.01 |
mm4__chr20 32.88 Mbp_chr20_32880205_F | TCGTCGGCAGCGTCTGTGGGTGGGTCTGTCCTAA | 60.1 | 0.01 |
mm4__chr20 32.88 Mbp_chr20_32880205_R | GTCTCGTGGGCTCGGTCATTCAAGCCGCCTTCTCT | 59.3 | 0.01 |
mm4__chr7 907.21 Kbp_chr7_907208_F | TCGTCGGCAGCGTCACCACACACAGCCACAGAAA | 60.0 | 0.00 |
mm4__chr7 907.21 Kbp_chr7_907208_R | GTCTCGTGGGCTCGGGCACGGTGTGTTTTGCCATA | 59.6 | 0.00 |
mm4__chr4 21.22 Mbp_chr4_21221089_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4__chr4 21.22 Mbp_chr4_21221089_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4__chr18 77.08 Mbp_chr18_77078876_F | TCGTCGGCAGCGTCCAATCCTGTGCTCTGGTCCC | 60.3 | 0.00 |
mm4__chr18 77.08 Mbp_chr18_77078876_R | GTCTCGTGGGCTCGGTCATGGAGCCACAGTCTTGG | 59.6 | 0.00 |
mm4__chr20 46.81 Mbp_chr20_46811122_F | TCGTCGGCAGCGTCGCCACCGTCTTCTCCAATGA | 60.0 | 0.00 |
mm4__chr20 46.81 Mbp_chr20_46811122_R | GTCTCGTGGGCTCGGCTAACCCCTTTGTCGCACCC | 60.9 | 0.00 |
mm4__chr10 87.10 Mbp_chr10_87095463_F | TCGTCGGCAGCGTCGGGTCATGTGAGTCACGGG | 60.0 | 0.00 |
mm4__chr10 87.10 Mbp_chr10_87095463_R | GTCTCGTGGGCTCGGTTTCCTGCCCACGTGTCAG | 60.2 | 0.00 |
mm4__chr2 104.69 Mbp_chr2_104687203_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4__chr2 104.69 Mbp_chr2_104687203_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4__chr2 231.71 Mbp_chr2_231710430_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4__chr2 231.71 Mbp_chr2_231710430_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4__chr9 136.66 Mbp_chr9_136661864_F | TCGTCGGCAGCGTCTCAAGTTGCCCAGCTGAGTG | 60.5 | 0.00 |
mm4__chr9 136.66 Mbp_chr9_136661864_R | GTCTCGTGGGCTCGGGGGTGTGAGCCCTGCTTT | 59.8 | 0.00 |
mm4__chr19 16.00 Mbp_chr19_16000802_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4__chr19 16.00 Mbp_chr19_16000802_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm3__chr6 9.05 Mbp_chr6_9050342_F | TCGTCGGCAGCGTCTCAGAGAGCTCCCATCTCCC | 60.1 | 0.00 |
mm3__chr6 9.05 Mbp_chr6_9050342_R | GTCTCGTGGGCTCGGGCACCATTGACAACTGCAGG | 60.0 | 0.00 |
Primers underlined, off-targets in bold.
ontarget_mm0__chr7 5.53 Mbp_chr7_5529726 |
TGGTGAGCTGCGAGAATAGCCGGGCGCGCTGTGAGCCGAGGTCGCCCCCGCCCTGGCCACTTCCGGCGCGCCGAGTCCTT AGGCCGCCAGGGGGCGCCGGCGCGCGCCCAGATTGGGGACAAAGGAAGCCG |
mm4__chr20 62.96 Mbp_chr20_62963019 |
CTAGGGCTAAGGCAGACACCCAGGAAGACCTGCTGGGCACAGGTCAAGGCAGGGTGCAGGAGCAGCCGAGTCTTTGGGTG GCCAGGGGGCTCTGGAGGAGGCCGTGTGGAGGGTCGTTCAGAACGCGGTTCTCAAAGGTG |
mm4__chrX 18.88 Mbp_chrX_18879194 | TTTCACCAGCTCTCTGTGGCTGTGCCCCCAGTCCTTTGGCCTTCAGGCGAATCCTGCCACCTGTGAATTCC |
mm4__chr10 48.90 Mbp_chr10_48898354 |
ACCCCAAGCTCAGCAATAGCAAAGCTGCATCCCCAGTCCCTGGGCCTCCAGGGCAGCTGGCAGAAAAGGGGATCCTAGGG ACCAC |
mm4__chr8 41.70 Mbp_chr8_41701860 |
CTTCCCATCTCCCCAAACCCCATCCACTCCACTGCTGCCCGGAAAGCTGGTCCCGCCCCTAGTCCTCGGGCCGCTAGGTG GCAGCACAGCCCCGCTGGAAGGAGGACAAGCTCC |
mm4__chr17 18.85 Mbp_chr17_18850909 |
CAGGAAGCAAAGCCACCAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTAGGAGGTGCTTCCAGTGA AGGGGGAAGGAAAAACTGCTTGCAGGACAGTGGCATAGG |
mm4__chr1 156.60 Mbp_chr1_156595898 |
AGGGTCCAAGTCAAAGCGAGGGTATCGGGGGAAATGGGCCTAGTCCTTAAGCCTGCAGGGAAAGTTGGTGGAGGGTAGGA GTGGGGAGCTGCCTATCTTC |
mm4__chr20 62.33 Mbp_chr20_62328812 |
CTCTGGCACCAACTCCCTGCCACTGGGCGCCCAAGGACTGGGGTACTCACGCCTGCAGTTGGGGAAGCCCCAGTATCCGG TGGCACAGCGGGAGCAGTCACGGCCAATGACATGGGCATGGCAG |
mm4__chr2 43.33 Mbp_chr2_43330777 |
GGCAAGAAGGTCTGGAGCATGAAGCCCTATCCATGGAAGGCAGCTCCTAAGAGAGGGCCCTTGGCAGCCCAAGGACATGG AGTTGTAGAATTTTCCACAAGGATGATCAGGCCTCGGGAGAGGAAGAAAGCAGG |
mm4__chr1 155.21 Mbp_chr1_155207412 |
TCCAGCTACCTCTCCCACATCCATCGGCCCATCCCACCACCAGACCTCCGGGAGAGCCCAGGCTTCTTGGTCCCCACCCC CGCCCTGTCCTTGGGCAGCCAGGAGCCCAGGGGGACGAAGCCCAGGGACCTACAGTAC |
mm4__chr3 51.70 Mbp_chr3_51698892 |
TGGTGTTTAGCTGGCCTTGATCCTTGTTCAGGGTCTATAGTAGCATGTCTGCAAGAGCAGGGGCTGGAGGCCTAAGGACT GGGGGTGCTGGTCTTCTGATATCTGTGGGTCAGTCAGCGTTGTCCAGGGTGGAGAGGAG |
mm4__chr9 91.07 Mbp_chr9_91072327 |
AGGCAGTCAGAGGACAAACGGCCTTTGACCCCCCCACTCTCCTGGTGCTGGAAAGGAGGCAGCGCCCAGCAAATGGGACT CTCCCTGGAGCCATAAGGACTAGGAGGGCTGGCATTTGGCTGAGTA |
mm4__chr9 133.46 Mbp_chr9_133460900 |
CACGCATCCCAGTCACAGACCCTGACCTTAGGCTGCCAGGGAAGCTAGGCTCTTAAGCACAGCCAGAAAAGGACAAAGAG GGAGGCAGGTCAGCTCCAGGAGTGAATGGAAGCCGT |
mm3__chr19 5.88 Mbp_chr19_5876669 |
GCTGGGTGGGTGATAAAGCTGTCAGCCTGCTGGAAATTTCTCTCCCCTTGGGGCCTAAGGGCTGGGAGCCAAGGGCAGCT GCCGCTCAGGAGGAGGGAGAAGGC |
mm3__chr7 2.61 Mbp_chr7_2607987 |
GGCAGCCTTAAGACCCTGTTGAGGAGGGGAGTGTGGCGTGCGGGGCTGTTTCACGTGGGAAGTGTCAGGCGAAGGGCTTT GCTGTGCTGAGTCCTTAGGTCTCCAGGGTGGAGTCAGGGAAGGAGGAGA |
mm4__chr22 18.04 Mbp_chr22_18044207 |
GCTGCTGATGGAGGCTACAAACAGTGATAGAAGCATGCAGAAGCTACACAGCACAGGCCAAGGTGCTGTGGGAGAGGCGG AGGAGGAACACTGACCACTGGCGGCCTGGGGACACGGGAGGGCTGGCTTCTGAAACTC |
mm4__chr12 48.08 Mbp_chr12_48080987 |
CTCCACTGACCCAACCTGTGGCCTGGAGGGCTGTTTGGAAGGGTAAAATTGCCCAAGCAACCCCCAGTCCTCAGGCTGGC AGAGGAGGCAAAAGAAGGAAGGCTGAGTGGTCC |
mm4__chr9 128.92 Mbp_chr9_128916409 |
CTGTGGAGGGCTGACAAGGAGCAGGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGTCCTCAG GCCCGGAGGGGCAGGCCTAGCTTCTCCCAGAA |
mm4__chr1 87.61 Mbp_chr1_87613196 |
TGTCCTCCAAATTGCCACCTTTTCCCCCTAACCTACACCTGGCGGACTAAGGTATGGGAATAGTTCTGACCTCTGGCCTT AGAGCCAAGGTTAATTGGCAGCAAGATCACATGACT |
mm4__chr17 49.49 Mbp_chr17_49487072 |
CTGCTGCTCTCTCTGGCAGGGCCTGCGGCACTGGCAGCTCCAGGCCAGGCCCCTGACCTCAGGCCGCCATGGGCCAGCCC CCAGACACCTCTCAGTGTTTTTGCCTCGATTTTCAGCCCA |
mm3__chr6 168.07 Mbp_chr6_168073381 |
GAGTCTGACACAGGAAGCCCCAGATCCACACCTGCCCTCAGGGGCTCATGGTGTCCACTCAGGGTCCCCTGGGGGACTCA GGACTGGGTCTAAATGCATGAGGTCACATCAGAAAGGCTGGCC |
mm4__chr1 1.04 Mbp_chr1_1037018 |
GCTTGTCCTGGAAGACCCTCTCCCTCCTGGCAGCCCCAGGACTGGGGGCAGGAGGGTATGGACTCAGAGAAGGACCCGAG TCTTGC |
mm4__chr3 127.20 Mbp_chr3_127195686 |
TCTTCCATTCCATGCTGCCCCTGACCCCAGCCCTCAGGACCCCAGGGGTCCTGACCGCACCAGCCTCCGCTCCTTGATGC TGGGGCTGGGGGTGTCCTCTCCTGGCCACAGGACCTCTCCACCGTCTCTCT |
mm4__chr10 61.98 Mbp_chr10_61979634 | TCCAAATGTCCTTCCCCAGCTCCAAGTCCTTAGCAAACCAGGGGTCTACCCTCTATCCAGGTCTG |
mm3__chr15 40.95 Mbp_chr15_40952429 |
TTCAGCTGCCTCTGTTTCCCTTTTACAGTCAGTGACATCCCCTGAGGGCAGTCCCTTGCTGCGTATTGGGTCAACCCCCG GCGGCCTGTGGACTCGGCTGGGAGGCCAGAAGCCGAGGGAGAAGAC |
mm4__chr20 17.93 Mbp_chr20_17929848 |
CATCCCCAACTATCAGCCCGGCCACAGTCCCGGGGCTCCCTGTCCTTGGACTGCCAGGGGTCAGGTGCCAGTGTGTGAGC CAGTAT |
mm4__chr6 125.96 Mbp_chr6_125956946 |
GGCGACGTCTCGAGGTAAAACGGAGGAGGTGCGGGACGCGGAGACTGCGCGGGCCCGGTAGCCCTGGANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGGTGAACCGCAGCG |
mm4__chr7 151.14 Mbp_chr7_151137344 |
CCACTAACCTCCAGCACCTGGCGGGCTCCTCCGCTTCAAGGTTGAAGCACCTCAGGTTCGGCCCCCGTGTTCTTAGACCG CCTGGGGCCATTTCTTTGTGGTCTCAGTGTTGGGTG |
mm4__chr17 81.17 Mbp_chr17_81165776 |
GAGGCCGGTTTGTGCTGGGGCCCAGGGCCTGCCCCTCCGAGATCTGGGGCCGCCAGGGGGTCCGGCTGCTTCTGCTGCTG GGCTCGGGGCGGGGAAAGGGTTAATT |
mm4__chr10 78.78 Mbp_chr10_78779999 |
AGATGAGGGTGTCAGGGTCAGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNCCCTTGAGGACAGCACACGGGAACATA |
mm3__chr4 71.71 Mbp_chr4_71714482 |
ACCTAGCAACTTTAGGAGCACTCCAAGACCTGAGGCTGCCAGGGGTGTTGAGGAAACCAGAAAAGAGTATAGCTATCCCC TTATTGAGTCAACA |
mm3__chr15 83.65 Mbp_chr15_83654414 |
GTCTCCAAGCAGAGTCGGGGCGTGCCACGCGGGCCCCAGGGGGCCTCAGGACTGGGGTGCTCCTCACTGCTGGGCACCTC GGGTCGGGCGCGCTTCGTGCCGTCCCGGAAGGTTCAGGGAGAGTC |
mm4__chr16 35.03 Mbp_chr16_35027206 |
AAGGAGAGTGAGGGGACTGCTCCTGCCAGGGCCCAGTTCAGCCGCAGGACCCCATGGCGGCCCATGGTCTTGGTCCATGC TGTGGGAGCAGTACAGGATTTATTCACTCAATAAACATTCACTAGGGGCTTACCATGCC |
mm4__chr16 34.38 Mbp_chr16_34384599 |
GGCATGGTAAGCCCCTAGTGAATGTTTATTGAGTGAATAAATCCTGTACTGCTCCCACAGCATGGACCAAGACCATGGGC CGCCATGGGGTCCTGCGGCTGAACTGGGCCCTGGCAGGAGCAGTCCCCTCACTCTCCTT |
mm4__chr19 4.05 Mbp_chr19_4052799 |
GACCGAATTGCAAACTGCCCGGGCCTGGCCTTGAACTCCTGCTGTTTAGGGACCAAGTCCTGTGGCTCCCAGGGGGGCAC AGTGATCTCTCAAGCT |
mm4__chr8 131.04 Mbp_chr8_131043391 |
TGGCAATGGAAGGCATCACTTTATTTTCTCACTTCTTTCTCCTTGGGGCCCTAAGGACTCAGCCTGAATAAATGAGGGGC TGGATGCAG |
mm4__chr1 34.91 Mbp_chr1_34913068 |
GTTGGGCTGGTGTCCTAGTCCCTGGCCTCCCTCAACCCCACTAGCCAGCCCTGTTGCTGAAGACTTGGCATGCCTTGTAT CCAACCCCACTCCTTAGGACCCCAAGGGAAATCACCTCCTTTTCCCCTCACTGC |
mm4__chr6 7.72 Mbp_chr6_7723333 |
ATCTGCTCCTGTCCCTCCAACTCCACCCACCCCATGCCTCCTCCTCTTGAATCACATGTGGACGTTGTCTAGCTCCCTGT CCTGAGGCTTCCAGGGGAGCACTCGGGCTGTCTAATG |
mm4__chr1 7.12 Mbp_chr1_7123874 |
CCATTCACTGCCAAGTCCCTTTGAGGGCACAGTGAGAACCAAGGCCTTGCAGAGGGAGAGGTCTGTGGGGTTGCATCCAA GTCCAAGGGCAGCCAGGGGAGGTGGCTGTGGGCTTCACGGGGAAAGTGTCTCATGGGG |
mm4__chr2 129.67 Mbp_chr2_129669480 |
CAAGGAACCCGCATGAGCTAGCCGAGTCCTGAGACTGCCAGGGTCCACACACCCTTCCCGGGTGAGGTGTTGGCTCGGTG GGCCTGTGCACCAGGTGGGCAGGACCCCAGTGGCTGCCCCATCATC |
mm4__chr5 127.23 Mbp_chr5_127229754 |
TCAAGTGGCTTCCTCCCTCACCTCCTCCGGGCGTGTGTATCAGCCGGCATGGCGTCTCTGCCCCATGCCCTGGGCCGCCA GGGGCCCGCAGGCTACGCGGGAGGTGGAGCGAGGGGAG |
mm4__chr10 133.22 Mbp_chr10_133218508 |
CATCTGCCTGTGGACACGACAGCGGCCTCTCCCTGGGTGGGGTCGCCTTTCCCAGTCCTGAAGCTGCCTGGGGAGGTGCA TCCAGGCACAATCTTGC |
mm4__chr5 24.49 Mbp_chr5_24491615 |
GAGGAGGATGGCGATCAAGGCCCCAGTGCTGAGGCCGGCAGGGAGGAGCAGGGCTTCAGCACTGCAGGATTGCATGTTGC CTTGGCTGTCACAAGCACAC |
mm4__chr11 65.00 Mbp_chr11_64996966 |
ACAGAGGTGCATGGCTTAGGCGGGGGAGCAGAGTGGTCCCTCAGCAGCTGTGACTTCCCAGTGCCCTCTGGAGGCCTAAG GAAGTGGCAGCTCTTTAAATCCCCAGTGGCCACTCCGCCCCCAGAGGGCCAAGTTTCAGT |
mm4__chr14 96.48 Mbp_chr14_96479831 |
TCCTCCTATGGGCTTGGTGAGAAAGAACCAGCTTCTGCCTGGTGGAAGCTTCCTGGCCAGGCCCACACCTTGGGCCTCCA GGGGCTGCTCTCTACCCCCAACTGCCCAATGGGACAGCATTTG |
mm4__chr14 99.59 Mbp_chr14_99586877 |
GCCCTACCTATAGCACACCCCAAATCCCACCAGGCGGCCTCAGGGCTGGGCACCACAGCCAAGCCCGCAGCCACGGGCGG CACTCCCGCGCTCACAGAGGGCCTCTGCCCTCCTACCGGGGACCTG |
mm4__chr12 52.91 Mbp_chr12_52907621 |
CAGTATGCAGGCTGGAGGGCTGACCCAGACCTTACCCAGCCAGGGGAAGCCCTTTTTTTCTGGGGCAGCCCAGAACCGTC TAGGGCCAGAAGTGTTTGTGTCTCATTTGTCATCTCTCTATTGCCCAGAGACCCCA |
mm4__chr4 76.42 Mbp_chr4_76421360 |
CATCCGAGCGTCGAAGTCCCCACCACCGCCCGGGCGCCCTAAGGAGTGGGGGTGTACCCAGCCCGGAGTCAAATCCTGGA GCCCTGCCCCAGAAACTACCCTG |
mm4__chr17 47.70 Mbp_chr17_47700811 |
CAAGAAAGGGGCAGCAGAGAGCGGCAAGGGAGCTGTGTTGGTGGGGGGCCCAGTGCTGGGGCCTCCAGGGGGGCACTGGA CAGCAAGGGAGGGGTGAGCAGCCACCCGGCAACAGTGGAACCTGGTGCCTTTC |
mm4__chr5 137.03 Mbp_chr5_137033153 |
TCAGCTCGGCTATGATGCAGCTGAATGAGAGCCCAGTGGGGGTCAGGGGAGATGAACTCCCTCGTGGCGGCCGAAGGCCT GGGTGAGGGTGGAGCAGCTGGCGATCTGCAAGAGGAGACT |
mm4__chr14 90.61 Mbp_chr14_90613709 |
ATAGCCCAGTCACCTCACCTCTTCTCTGCCGGGCCCTTAGGCTGCCAGGAGCACTTCCCAAGGAGGGAGGCAGGAAGGGA GAGAAAACCATTCCTGGTGAGTGTTGTAGTAGAGCGAAAGGAAACTGGAAGGACCCCAG |
mm4__chr8 51.41 Mbp_chr8_51408556 |
CTCGGTAACCCCTCAGCATCCTAGTGCCAGGGTCCCCCAGGACCTTAGGCAGCCAGTGGCTGTAGGTGATGTGCTGCAGC TCCGCGCCCACGATCTTCCTGGCTTCCTGGTAAACCGT |
mm4__chr19 14.56 Mbp_chr19_14558954 |
CTGTTCAGCAGCTGCCTGTACCCTCTGCAGCCCTGGGCTTCCCCTGGGAGCCCCTGCCCCCTGTTGGCCTCAGGCCTGGG CAGGCGTGTGTGTGTGTGGCAGGCACAGAGCAGAGATTGGGGTGG |
mm4__chr4 143.34 Mbp_chr4_143337396 |
CGGGGCTGGTTCTTAAACGAATGCCGGTCTCTTTCCCCTTGGCCCCTACCCCTGGCGGGCTCGGGACAGGGTGCCTTGCA CTCCCTCACGCCCAGGCATCCACTTGGCCGGACAACTTTCT |
mm4__chr2 96.89 Mbp_chr2_96891703 |
CACCAACAGCAGCTCTCTCAGCCTCTTCCCAGAGGGAGAGGCTGGGCCAAGGCCTGAGGCAGCCAGAGGAGGTGGGGAAG GAGCTGGGCAGAAGTGTTT |
mm4__chr1 205.27 Mbp_chr1_205268871 |
ACTGCTCTTGTGGTGGTTGTCTTCTTTTGGACTCCTGCATCCATTTTCTAGATAGAAAAACCAAGTCCAGAGGCATCCAG GGGCACTCCTATGGTCCCAGGGTTTACCCATGCTTCCTCTGCC |
mm4__chr14 24.16 Mbp_chr14_24161667 |
CCAGCCTCAGTGGACCATTTGTTTCCTTGCCATCTGGCCCTGCCCACTTCTGCTGCAGCTCCAACCCCACCCCTACTTCC TGCCCCACCTACTCCTGGGGCCGGCAGGGGGTGGGGGTCAGGCTAGGTTGTGTAGGCTGT |
mm4__chr2 3.29 Mbp_chr2_3291936 |
GGATGCTGTCAGCCCCAAGCCTGTCTGTGTCCTGGTCCTGTGGCCGTCAGGGGCCCCGCTGGGCCATCCACTCCAGGGGC ACCATGCACACGTGCTCGCCACGGGGCCACATGGCAGCCTATGTCCAC |
mm4__chr4 8.47 Mbp_chr4_8473258 |
CCTGAGCATGACCCATGAGGGCCACAAGGGCCAGCCCTGCCTCTGTCCCTGCCCCTTCCTGAGGCCGCCAAGGGGCGGCG CGCTGCATCCATGCTGGCTGGTATGG |
mm4__chr3 193.81 Mbp_chr3_193813153 |
ACTGCAGTGCTCTGATGAGGACAGGTCTCAAGTGTGGATCAGCCTTTTGGATAAGCATGAATCCTGTTTGCCTACTCCTT AGCCTCCCAGGGGTGGGGCACTACTTCCAATGA |
mm4__chr20 32.88 Mbp_chr20_32880205 |
TGTGGGTGGGTCTGTCCTAAGAGGACCAGACCCAGACCAGGCCACGGGGAAGTCAAAGAGCTGGAAGGCAGCCCCGGTCC TCAGGCAGCCTGGGGTTTAATAGAGAAGGCGGCTTGAATGA |
mm4__chr7 907.21 Kbp_chr7_907208 |
ACCACACACAGCCACAGAAAAGTAGCCCGGGCATCCCCCTGGGAGCCTAAGCACCTGGACACGCCACCTTCTATGGCAAA ACACACCGTGC |
mm4__chr18 77.08 Mbp_chr18_77078876 |
CAATCCTGTGCTCTGGTCCCTGCCTGTGACCCAGTGGAGCTGGGAGCCCCAGGCGGGCTCAGCACTGGGACTCCAGGAGC CTGGCTGTGCCCTGGGCACTCCTGCCCAGCACCCTCCCAAGACTGTGGCTCCATGA |
mm4__chr20 46.81 Mbp_chr20_46811122 |
GCCACCGTCTTCTCCAATGAGAGCGATGACAGGATCTAAGGGGCCCCCTGGCGCTCTAAGGTCCTGGCCAGTGGAGACCC TGGGGTGCGACAAAGGGGTTAG |
mm4__chr10 87.10 Mbp_chr10_87095463 |
GGGTCATGTGAGTCACGGGCGCCCCTCCTTTCCGCCCGCGCGCCCTCGGAACGGGCGGCCCACCCTGGCCTGTCCTCTGG CGGCCTCAGGCCGGGGCCGGGCGTGCAGGGGCTGACACGTGGGCAGGAAA |
mm4__chr9 136.66 Mbp_chr9_136661864 |
TCAAGTTGCCCAGCTGAGTGGGGCTGGAGAGGTGGGGGCACACTGACCGCCCAGGGCCAGGGAAATGGGGGTGTCCCAGG CATCAGGCCGACAGGGGCTGACCCCAAAGCAGGGCTCACACCC |
mm3__chr6 9.05 Mbp_chr6_9050342 |
TCAGAGAGCTCCCATCTCCCACTGTGTGCAGCTGAGTTCCAAGCACTCCTGGCGGCATAATGACTGGGACAAAGATATTT CCTGCAGTTGTCAATGGTGC |