← return to the list of all guides

Contents:

PCR primers for off-targets of GATGGAGGGGAAGACGGCCC GGG

In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.

In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.

NamePrimer Sequence Tm CFD Score
ontarget_mm0__chr7 5.53 Mbp_chr7_5529555_F TCGTCGGCAGCGTCCTCCCCTACCTGGTGCCT 59.9 1.00
ontarget_mm0__chr7 5.53 Mbp_chr7_5529555_R GTCTCGTGGGCTCGGTGGATGATGATATCGCCGCG 60.4 1.00
mm2__chr22 15.72 Mbp_chr22_15721565_F TCGTCGGCAGCGTCGTGCTCGTCATTGACAACGG 59.8 1.00
mm2__chr22 15.72 Mbp_chr22_15721565_R GTCTCGTGGGCTCGGATCATGTTCTGGTGCCTGGG 60.0 1.00
mm2__chr2 131.26 Mbp_chr2_131263634_F TCGTCGGCAGCGTCGTGCTCGTCATTGACAACGG 59.8 1.00
mm2__chr2 131.26 Mbp_chr2_131263634_R GTCTCGTGGGCTCGGCTCTTTCTGATGCATGCCCC 58.9 1.00
mm2__chr2 130.66 Mbp_chr2_130656828_F TCGTCGGCAGCGTCGTGCTCGTCATTGACAACGG 59.8 1.00
mm2__chr2 130.66 Mbp_chr2_130656828_R GTCTCGTGGGCTCGGCTCTTTCTGATGCATGCCCC 58.9 1.00
mm2__chr2 130.46 Mbp_chr2_130463841_F TCGTCGGCAGCGTCCTCTTTCTGATGCATGCCCC 58.9 1.00
mm2__chr2 130.46 Mbp_chr2_130463841_R GTCTCGTGGGCTCGGGTGCTCGTCATTGACAACGG 59.8 1.00
mm2__chr2 130.08 Mbp_chr2_130075269_F TCGTCGGCAGCGTCCTCTTTCTGATGCATGCCCC 58.9 1.00
mm2__chr2 130.08 Mbp_chr2_130075269_R GTCTCGTGGGCTCGGGTGCTCGTCATTGACAACGG 59.8 1.00
mm2__chr14 19.40 Mbp_chr14_19402806_F TCGTCGGCAGCGTCATCATGTTCTGGTGCCTGGG 60.0 1.00
mm2__chr14 19.40 Mbp_chr14_19402806_R GTCTCGTGGGCTCGGGTGCTCGTCATTGACAACGG 59.8 1.00
mm2__chr14 19.00 Mbp_chr14_18998946_F TCGTCGGCAGCGTCGTGCTCGTCATTGACAACGG 59.8 1.00
mm2__chr14 19.00 Mbp_chr14_18998946_R GTCTCGTGGGCTCGGATCATGTTCTGGTGCCTGGG 60.0 1.00
mm1__chr5 131.66 Mbp_chr5_131660014_F TCGTCGGCAGCGTCATGCCCATCATCACACCCTG 60.1 1.00
mm1__chr5 131.66 Mbp_chr5_131660014_R GTCTCGTGGGCTCGGTGTGGAAGGTCTGCTTCACG 60.2 1.00
mm0__chr11 1.80 Mbp_chr11_1803993_F TCGTCGGCAGCGTCCGCCACCCACATAGAAGTCC 60.4 1.00
mm0__chr11 1.80 Mbp_chr11_1803993_R GTCTCGTGGGCTCGGAACACCTCTGGCATGTGCAA 60.4 1.00
mm2__chr2 73.90 Mbp_chr2_73901393_F TCGTCGGCAGCGTCAGGCTTCGCAGGAGATGATG 59.8 0.90
mm2__chr2 73.90 Mbp_chr2_73901393_R GTCTCGTGGGCTCGGTATCCAGATGAGCACGCACC 59.8 0.90
mm3__chr2 86.84 Mbp_chr2_86840428_F Primer3: not found at this Tm N.d. 0.65
mm3__chr2 86.84 Mbp_chr2_86840428_R Primer3: not found at this Tm N.d. 0.65
mm1__chr3 175.98 Mbp_chr3_175978477_F TCGTCGGCAGCGTCGAGTCCTTCTGACCCATGCC 60.1 0.57
mm1__chr3 175.98 Mbp_chr3_175978477_R GTCTCGTGGGCTCGGGCAAAGGCTCCTGTATGTGC 59.5 0.57
mm4__chr22 49.33 Mbp_chr22_49333612_F TCGTCGGCAGCGTCGAACCTCCCACTTTCTCCGG 60.0 0.55
mm4__chr22 49.33 Mbp_chr22_49333612_R GTCTCGTGGGCTCGGCTTTGGAAGCTGCGTGAACA 59.3 0.55
mm4__chr10 88.95 Mbp_chr10_88948822_F TCGTCGGCAGCGTCCTCACCTGATGTCTGGGACG 59.8 0.47
mm4__chr10 88.95 Mbp_chr10_88948822_R GTCTCGTGGGCTCGGACTGCCTTGGTGTGTGACAA 60.0 0.47
mm3__chr5 80.30 Mbp_chr5_80302745_F TCGTCGGCAGCGTCCTCTTGCTCTGGGCCTCATC 60.1 0.40
mm3__chr5 80.30 Mbp_chr5_80302745_R GTCTCGTGGGCTCGGTGGCATATGCAAGGCTAGCT 59.5 0.40
mm4__chr16 79.36 Mbp_chr16_79357644_F TCGTCGGCAGCGTCGCATCCGGGAAAGTTTGCAG 60.1 0.35
mm4__chr16 79.36 Mbp_chr16_79357644_R GTCTCGTGGGCTCGGCAGTCCAAGCAGTGCCAATG 59.7 0.35
mm4__chr8 119.21 Mbp_chr8_119208668_F Primer3: not found at this Tm N.d. 0.33
mm4__chr8 119.21 Mbp_chr8_119208668_R Primer3: not found at this Tm N.d. 0.33
mm3__chr9 137.27 Mbp_chr9_137271817_F Primer3: not found at this Tm N.d. 0.32
mm3__chr9 137.27 Mbp_chr9_137271817_R Primer3: not found at this Tm N.d. 0.32
mm3__chr9 137.27 Mbp_chr9_137271779_F Primer3: not found at this Tm N.d. 0.32
mm3__chr9 137.27 Mbp_chr9_137271779_R Primer3: not found at this Tm N.d. 0.32
mm4__chrX 25.02 Mbp_chrX_25015360_F TCGTCGGCAGCGTCCCTAAGCGAAAACGGGCCTT 60.9 0.30
mm4__chrX 25.02 Mbp_chrX_25015360_R GTCTCGTGGGCTCGGTGCTGCCTCAAAGAGCGTTA 59.9 0.30
mm3__chr5 57.48 Mbp_chr5_57482602_F TCGTCGGCAGCGTCATCTCCCACGTAGCAGTCCT 60.0 0.30
mm3__chr5 57.48 Mbp_chr5_57482602_R GTCTCGTGGGCTCGGATGGGTCAGGGATGTGCAAG 60.0 0.30
mm4__chr1 27.38 Mbp_chr1_27381717_F Primer3: not found at this Tm N.d. 0.29
mm4__chr1 27.38 Mbp_chr1_27381717_R Primer3: not found at this Tm N.d. 0.29
mm4__chr22 45.93 Mbp_chr22_45927905_F Primer3: not found at this Tm N.d. 0.27
mm4__chr22 45.93 Mbp_chr22_45927905_R Primer3: not found at this Tm N.d. 0.27
mm4__chr20 37.44 Mbp_chr20_37439358_F TCGTCGGCAGCGTCCTTCTCCACACCCGTTCCTC 60.0 0.27
mm4__chr20 37.44 Mbp_chr20_37439358_R GTCTCGTGGGCTCGGGGGAATCTCAGAAGCCCCAC 60.1 0.27
mm4__chr2 131.63 Mbp_chr2_131626217_F TCGTCGGCAGCGTCGTGCTCGTCATTGACAACGG 59.8 0.27
mm4__chr2 131.63 Mbp_chr2_131626217_R GTCTCGTGGGCTCGGACTCCTTCTGATGCATGCCC 60.1 0.27
mm2__chr6 88.28 Mbp_chr6_88276905_F TCGTCGGCAGCGTCGAGTCCTTCTGACCCATGCC 60.1 0.27
mm2__chr6 88.28 Mbp_chr6_88276905_R GTCTCGTGGGCTCGGTGGATGATGCTATCACCGCG 60.3 0.27
mm4__chr16 78.29 Mbp_chr16_78289077_F TCGTCGGCAGCGTCTCTCGGTTAACACAAGGCGT 59.6 0.26
mm4__chr16 78.29 Mbp_chr16_78289077_R GTCTCGTGGGCTCGGAGTTTTACCTCCCAGCGCTC 60.0 0.26
mm4__chr20 64.20 Mbp_chr20_64202891_F TCGTCGGCAGCGTCGAAAAGAGGCTCGGGAGTCC 60.1 0.25
mm4__chr20 64.20 Mbp_chr20_64202891_R GTCTCGTGGGCTCGGCAGTTCACCTGCAAGCACAC 59.9 0.25
mm4__chr14 104.89 Mbp_chr14_104886980_F TCGTCGGCAGCGTCGGACTTCCACTCCCAGGACA 60.8 0.25
mm4__chr14 104.89 Mbp_chr14_104886980_R GTCTCGTGGGCTCGGCACACTCGGCATCCACAGAA 60.3 0.25
mm4__chr18 13.21 Mbp_chr18_13213299_F TCGTCGGCAGCGTCGGCAGAGTGAGGACAAACCA 59.8 0.23
mm4__chr18 13.21 Mbp_chr18_13213299_R GTCTCGTGGGCTCGGTCGTCCTCAGGTCACCAGTA 59.5 0.23
mm4__chr11 19.06 Mbp_chr11_19056165_F TCGTCGGCAGCGTCACTGAGGTACACCAGGCAAT 58.6 0.23
mm4__chr11 19.06 Mbp_chr11_19056165_R GTCTCGTGGGCTCGGCGCCTTCTCTGTCTACGTCC 59.9 0.23
mm4__chrY 340.61 Kbp_chrY_340609_F Primer3: not found at this Tm N.d. 0.22
mm4__chrY 340.61 Kbp_chrY_340609_R Primer3: not found at this Tm N.d. 0.22
mm4__chrY 340.57 Kbp_chrY_340575_F Primer3: not found at this Tm N.d. 0.22
mm4__chrY 340.57 Kbp_chrY_340575_R Primer3: not found at this Tm N.d. 0.22
mm4__chr2 240.70 Mbp_chr2_240698181_F TCGTCGGCAGCGTCTGCCTTCTCTTGCAGGGATG 60.0 0.21
mm4__chr2 240.70 Mbp_chr2_240698181_R GTCTCGTGGGCTCGGGGCCGTAGAACAGGTTCCTC 60.1 0.21
mm4__chr2 240.68 Mbp_chr2_240676696_F TCGTCGGCAGCGTCGGCCGTAGAACAGGTTCCTC 60.1 0.21
mm4__chr2 240.68 Mbp_chr2_240676696_R GTCTCGTGGGCTCGGTGCCTTCTCTTGCAGGGATG 60.0 0.21
mm4__chr4 8.24 Mbp_chr4_8240525_F TCGTCGGCAGCGTCTGAGTGGGGTGTAGGGACAA 60.1 0.19
mm4__chr4 8.24 Mbp_chr4_8240525_R GTCTCGTGGGCTCGGATTCCACATGTCCGGCCAAT 60.0 0.19
mm3__chrX 53.14 Mbp_chrX_53143810_F TCGTCGGCAGCGTCCATGGCCCATGTAGGAGTCC 59.8 0.19
mm3__chrX 53.14 Mbp_chrX_53143810_R GTCTCGTGGGCTCGGCTCTGGCATGTGCAAAGCTG 60.1 0.19
mm2__chr3 12.07 Mbp_chr3_12070303_F TCGTCGGCAGCGTCTCATTGACAGTGTCTCCGGC 60.0 0.19
mm2__chr3 12.07 Mbp_chr3_12070303_R GTCTCGTGGGCTCGGGAGTCCTTCTGACCCATGCC 60.1 0.19
mm4__chr17 31.59 Mbp_chr17_31586521_F Primer3: not found at this Tm N.d. 0.19
mm4__chr17 31.59 Mbp_chr17_31586521_R Primer3: not found at this Tm N.d. 0.19
mm4__chr5 116.69 Mbp_chr5_116686586_F Primer3: not found at this Tm N.d. 0.19
mm4__chr5 116.69 Mbp_chr5_116686586_R Primer3: not found at this Tm N.d. 0.19
mm3__chr20 61.06 Mbp_chr20_61057787_F TCGTCGGCAGCGTCTGAACGACACTCCAGGAAGC 59.9 0.18
mm3__chr20 61.06 Mbp_chr20_61057787_R GTCTCGTGGGCTCGGGATCGACTCCCCAGGAAAGC 60.1 0.18
mm4__chr17 81.51 Mbp_chr17_81512252_F TCGTCGGCAGCGTCCCATCCACTCACCTGGTGTC 60.0 0.18
mm4__chr17 81.51 Mbp_chr17_81512252_R GTCTCGTGGGCTCGGATGGAAGAAGAGATCGCCGC 60.2 0.18
mm4__chr1 49.05 Mbp_chr1_49049204_F Primer3: not found at this Tm N.d. 0.17
mm4__chr1 49.05 Mbp_chr1_49049204_R Primer3: not found at this Tm N.d. 0.17
mm4__chr4 96.60 Mbp_chr4_96598600_F Primer3: not found at this Tm N.d. 0.17
mm4__chr4 96.60 Mbp_chr4_96598600_R Primer3: not found at this Tm N.d. 0.17
mm4__chr2 46.98 Mbp_chr2_46983265_F TCGTCGGCAGCGTCCTTGGACCACTTGTGCCAGA 60.1 0.16
mm4__chr2 46.98 Mbp_chr2_46983265_R GTCTCGTGGGCTCGGAAACCAAAGCTCAGCAACCG 59.6 0.16
mm4__chr5 170.37 Mbp_chr5_170365652_F TCGTCGGCAGCGTCTCTGCTCCATTCAGCCAAGG 60.0 0.16
mm4__chr5 170.37 Mbp_chr5_170365652_R GTCTCGTGGGCTCGGGAAAGTCCTGGATCCTCAAGG 57.7 0.16
mm4__chr9 131.56 Mbp_chr9_131555003_F TCGTCGGCAGCGTCGCCCAGCTCTACCCAGCC 62.1 0.16
mm4__chr9 131.56 Mbp_chr9_131555003_R GTCTCGTGGGCTCGGAGACAGCACGGAGGGGAG 60.6 0.16
mm4__chr1 112.79 Mbp_chr1_112794884_F TCGTCGGCAGCGTCAGCTATCTGCAAGGCCACTG 60.1 0.15
mm4__chr1 112.79 Mbp_chr1_112794884_R GTCTCGTGGGCTCGGAGCAGAGAAACTTCTTGCATTCC 59.4 0.15
mm4__chr5 141.75 Mbp_chr5_141748840_F TCGTCGGCAGCGTCATCCCTGAGGTTTGCCCATC 59.7 0.15
mm4__chr5 141.75 Mbp_chr5_141748840_R GTCTCGTGGGCTCGGTCTGGCTCTCACTTCCCACA 60.4 0.15
mm3__chr16 89.82 Mbp_chr16_89816161_F Primer3: not found at this Tm N.d. 0.15
mm3__chr16 89.82 Mbp_chr16_89816161_R Primer3: not found at this Tm N.d. 0.15
mm4__chr9 4.19 Mbp_chr9_4185850_F Primer3: not found at this Tm N.d. 0.14
mm4__chr9 4.19 Mbp_chr9_4185850_R Primer3: not found at this Tm N.d. 0.14
mm4__chr20 62.91 Mbp_chr20_62910879_F TCGTCGGCAGCGTCCCTCACATTCAGGCTTCGGT 60.0 0.14
mm4__chr20 62.91 Mbp_chr20_62910879_R GTCTCGTGGGCTCGGCCAGGCTGGGAAAGATGACA 59.6 0.14
mm4__chr11 62.93 Mbp_chr11_62929280_F Primer3: not found at this Tm N.d. 0.14
mm4__chr11 62.93 Mbp_chr11_62929280_R Primer3: not found at this Tm N.d. 0.14
mm4__chr20 24.82 Mbp_chr20_24818639_F TCGTCGGCAGCGTCGGGCTTGGTGTGGATCATCA 60.0 0.13
mm4__chr20 24.82 Mbp_chr20_24818639_R GTCTCGTGGGCTCGGGGACTCATGGCTCTCGATGG 59.9 0.13
mm4__chr19 33.72 Mbp_chr19_33719605_F TCGTCGGCAGCGTCCCTAGGGAGACTGGACTGCA 60.3 0.13
mm4__chr19 33.72 Mbp_chr19_33719605_R GTCTCGTGGGCTCGGCTGCCTTCCATTCCCTCTGG 60.1 0.13
mm4__chr1 182.60 Mbp_chr1_182604226_F TCGTCGGCAGCGTCAAGCAGTTGGACAACCTCCC 60.1 0.13
mm4__chr1 182.60 Mbp_chr1_182604226_R GTCTCGTGGGCTCGGGCCACCATCCTGCCTACTAC 59.8 0.13
mm4__chr11 45.40 Mbp_chr11_45400204_F TCGTCGGCAGCGTCAGGCCCTCACTCCTCAAGG 60.6 0.12
mm4__chr11 45.40 Mbp_chr11_45400204_R GTCTCGTGGGCTCGGAATGCCATTGCCAAGCACTG 60.0 0.12
mm4__chr17 43.81 Mbp_chr17_43810326_F TCGTCGGCAGCGTCGGGTGTGCAGGAGTGGAAAT 60.2 0.12
mm4__chr17 43.81 Mbp_chr17_43810326_R GTCTCGTGGGCTCGGGGCAGTGAGGAGAGCAGTTT 59.9 0.12
mm4__chr5 4.58 Mbp_chr5_4579560_F TCGTCGGCAGCGTCCTACCTGGGCAGTGCAGAC 60.0 0.12
mm4__chr5 4.58 Mbp_chr5_4579560_R GTCTCGTGGGCTCGGGCGTCCAGGGAGGTTGATAG 59.8 0.12
mm4__chr6 36.79 Mbp_chr6_36793235_F TCGTCGGCAGCGTCAGCTATTGGAGGGAGAGGCT 59.7 0.12
mm4__chr6 36.79 Mbp_chr6_36793235_R GTCTCGTGGGCTCGGCCGCTCTGCTCACCTGATTT 60.3 0.12
mm3__chr11 66.37 Mbp_chr11_66366165_F TCGTCGGCAGCGTCCACCCTGACACTCACTCCAC 59.9 0.12
mm3__chr11 66.37 Mbp_chr11_66366165_R GTCTCGTGGGCTCGGGTGCCTTGTGTTGGTCTTCAC 59.9 0.12
mm4__chr12 131.44 Mbp_chr12_131437132_F TCGTCGGCAGCGTCGGCTCAGGAAAGCTGCTCA 60.0 0.11
mm4__chr12 131.44 Mbp_chr12_131437132_R GTCTCGTGGGCTCGGCAGCCCAAGGAGAGGAAACA 59.5 0.11
mm4__chr17 73.45 Mbp_chr17_73446827_F TCGTCGGCAGCGTCCTCTGGGATTTGGGCCTACG 60.1 0.11
mm4__chr17 73.45 Mbp_chr17_73446827_R GTCTCGTGGGCTCGGTTCTGGCCTGGTTCTCCCTA 59.8 0.11
mm4__chrX 102.37 Mbp_chrX_102366260_F TCGTCGGCAGCGTCACAAGAAGCAGCACTGGGAG 60.2 0.11
mm4__chrX 102.37 Mbp_chrX_102366260_R GTCTCGTGGGCTCGGCATGGTGACTTGGGCAAAGG 59.3 0.11
mm4__chrX 102.32 Mbp_chrX_102320831_F TCGTCGGCAGCGTCATGGTGACTTGGGCAAAGGG 60.5 0.11
mm4__chrX 102.32 Mbp_chrX_102320831_R GTCTCGTGGGCTCGGACAAGAAGCAGCACTGGGAG 60.2 0.11
mm4__chrX 101.84 Mbp_chrX_101838996_F TCGTCGGCAGCGTCTCCCTTTTCTCCAGTGCCAC 59.8 0.11
mm4__chrX 101.84 Mbp_chrX_101838996_R GTCTCGTGGGCTCGGCAGAGCCTTCCATGGTGACT 59.3 0.11
mm3__chr12 113.81 Mbp_chr12_113812639_F TCGTCGGCAGCGTCCAATTATGGGGAAGTGGGGCT 60.0 0.11
mm3__chr12 113.81 Mbp_chr12_113812639_R GTCTCGTGGGCTCGGAAGTAAAAGGGGCCCTGCAA 59.8 0.11
mm4__chr4 118.81 Mbp_chr4_118813400_F Primer3: not found at this Tm N.d. 0.10
mm4__chr4 118.81 Mbp_chr4_118813400_R Primer3: not found at this Tm N.d. 0.10
mm3__chr3 123.39 Mbp_chr3_123393765_F Primer3: not found at this Tm N.d. 0.10
mm3__chr3 123.39 Mbp_chr3_123393765_R Primer3: not found at this Tm N.d. 0.10
mm4__chr15 77.50 Mbp_chr15_77496945_F TCGTCGGCAGCGTCTCCGACACAGACAGATCCCT 59.9 0.10
mm4__chr15 77.50 Mbp_chr15_77496945_R GTCTCGTGGGCTCGGGTGTTTCCTAGCCGGGACAG 60.3 0.10
mm3__chr2 19.80 Mbp_chr2_19799442_F TCGTCGGCAGCGTCGCCGAAGAGTCCAAAACAGC 59.7 0.10
mm3__chr2 19.80 Mbp_chr2_19799442_R GTCTCGTGGGCTCGGACTCCTCTCCCTTGTCCCTC 59.9 0.10
mm4__chr1 161.05 Mbp_chr1_161052589_F TCGTCGGCAGCGTCAGACCTCCACTTCCTGACCT 59.5 0.10
mm4__chr1 161.05 Mbp_chr1_161052589_R GTCTCGTGGGCTCGGGCAGAGCACAAGTAAGGCCT 60.3 0.10
mm4__chrX 9.84 Mbp_chrX_9842800_F Primer3: not found at this Tm N.d. 0.10
mm4__chrX 9.84 Mbp_chrX_9842800_R Primer3: not found at this Tm N.d. 0.10
mm4__chr15 44.40 Mbp_chr15_44403032_F TCGTCGGCAGCGTCTATGAGGCAGACAAGCAGGC 60.1 0.10
mm4__chr15 44.40 Mbp_chr15_44403032_R GTCTCGTGGGCTCGGGGTTATAGCATGGAGGCCAGG 60.2 0.10
mm4__chr4 42.27 Mbp_chr4_42272726_F TCGTCGGCAGCGTCCCCAATGAGTGTGCTGTTGG 59.4 0.09
mm4__chr4 42.27 Mbp_chr4_42272726_R GTCTCGTGGGCTCGGTTCACTCTTGTCCCTGGTTTT 57.3 0.09
mm4__chr11 64.76 Mbp_chr11_64759197_F TCGTCGGCAGCGTCAACTAGGATGCTGCCAGTGC 60.3 0.09
mm4__chr11 64.76 Mbp_chr11_64759197_R GTCTCGTGGGCTCGGGAGATCAAGTGTCCGGTGGG 60.1 0.09
mm3__chr16 8.32 Mbp_chr16_8318065_F TCGTCGGCAGCGTCGCCCCAAAGCATGAATGTGG 60.1 0.09
mm3__chr16 8.32 Mbp_chr16_8318065_R GTCTCGTGGGCTCGGTGTTCAATGTGGCTGGCAAA 58.8 0.09
mm4__chr11 20.26 Mbp_chr11_20260644_F Primer3: not found at this Tm N.d. 0.09
mm4__chr11 20.26 Mbp_chr11_20260644_R Primer3: not found at this Tm N.d. 0.09
mm3__chr15 34.79 Mbp_chr15_34794700_F TCGTCGGCAGCGTCGGGAAGTTTACCTGGTGCCG 60.9 0.08
mm3__chr15 34.79 Mbp_chr15_34794700_R GTCTCGTGGGCTCGGATGTGTGACGACGAGGAGAC 59.4 0.08
mm4__chr22 38.74 Mbp_chr22_38739783_F TCGTCGGCAGCGTCACCTTCTTTCTGCAGCGTCA 59.8 0.08
mm4__chr22 38.74 Mbp_chr22_38739783_R GTCTCGTGGGCTCGGGAGGAGATGCAAGCTCAGCT 59.8 0.08
mm4__chr2 17.88 Mbp_chr2_17879299_F TCGTCGGCAGCGTCCGTTCCTTCCCTTCCTCGAG 59.8 0.08
mm4__chr2 17.88 Mbp_chr2_17879299_R GTCTCGTGGGCTCGGAAAGGGGAGGGGAGGAATGA 59.8 0.08
mm4__chr5 177.47 Mbp_chr5_177467016_F Primer3: not found at this Tm N.d. 0.07
mm4__chr5 177.47 Mbp_chr5_177467016_R Primer3: not found at this Tm N.d. 0.07
mm4__chr17 67.43 Mbp_chr17_67433409_F TCGTCGGCAGCGTCGTAAGGCTGTGGAACCGGAG 60.3 0.07
mm4__chr17 67.43 Mbp_chr17_67433409_R GTCTCGTGGGCTCGGTCCCCAGCTTCCTCTCTGTT 60.1 0.07
mm2__chr1 229.43 Mbp_chr1_229433007_F TCGTCGGCAGCGTCGCAGCCTGACCTGGTGTC 60.3 0.07
mm2__chr1 229.43 Mbp_chr1_229433007_R GTCTCGTGGGCTCGGGACGAAGACGAGACCACCG 60.1 0.07
mm3__chr13 38.76 Mbp_chr13_38758313_F Primer3: not found at this Tm N.d. 0.07
mm3__chr13 38.76 Mbp_chr13_38758313_R Primer3: not found at this Tm N.d. 0.07
mm4__chr1 34.43 Mbp_chr1_34425474_F TCGTCGGCAGCGTCGAGCAGGTATGAGTGCAGGG 60.1 0.07
mm4__chr1 34.43 Mbp_chr1_34425474_R GTCTCGTGGGCTCGGGAGATGTCGGAGAGCCACTG 59.8 0.07
mm4__chr6 35.51 Mbp_chr6_35505318_F Primer3: not found at this Tm N.d. 0.07
mm4__chr6 35.51 Mbp_chr6_35505318_R Primer3: not found at this Tm N.d. 0.07
mm4__chr11 3.10 Mbp_chr11_3095215_F Primer3: not found at this Tm N.d. 0.06
mm4__chr11 3.10 Mbp_chr11_3095215_R Primer3: not found at this Tm N.d. 0.06
mm2__chr22 41.08 Mbp_chr22_41075137_F TCGTCGGCAGCGTCGGAGTCCTTCTGACCCATGC 60.1 0.06
mm2__chr22 41.08 Mbp_chr22_41075137_R GTCTCGTGGGCTCGGTGTTGACAACAGCTCTGGCA 60.1 0.06
mm1__chr19 9.52 Mbp_chr19_9518228_F TCGTCGGCAGCGTCAGTTAACAATGGCTCCGGCA 59.9 0.06
mm1__chr19 9.52 Mbp_chr19_9518228_R GTCTCGTGGGCTCGGGGAGTCCTTCTGACCGATGC 60.1 0.06
mm3__chr19 49.37 Mbp_chr19_49374724_F TCGTCGGCAGCGTCTTCTTCCTCCCCAGGTACCC 60.2 0.06
mm3__chr19 49.37 Mbp_chr19_49374724_R GTCTCGTGGGCTCGGGGGGATGGAGTTCTGTGTGG 60.0 0.06
mm4__chr14 64.75 Mbp_chr14_64749116_F TCGTCGGCAGCGTCGAGCCCCTGTCCCTGGAG 61.0 0.06
mm4__chr14 64.75 Mbp_chr14_64749116_R GTCTCGTGGGCTCGGGAGATGAGTCGAGTCGCGG 60.0 0.06
mm4__chr4 153.08 Mbp_chr4_153084795_F Primer3: not found at this Tm N.d. 0.06
mm4__chr4 153.08 Mbp_chr4_153084795_R Primer3: not found at this Tm N.d. 0.06
mm4__chr7 41.90 Mbp_chr7_41899393_F TCGTCGGCAGCGTCGTTGCCCTAGGTCACAAGCT 59.9 0.06
mm4__chr7 41.90 Mbp_chr7_41899393_R GTCTCGTGGGCTCGGCCAGTCACAGCCCTGATGG 60.0 0.06
mm4__chr2 186.59 Mbp_chr2_186589973_F TCGTCGGCAGCGTCGCTGAGCTCTCCCCTGTAGA 60.3 0.06
mm4__chr2 186.59 Mbp_chr2_186589973_R GTCTCGTGGGCTCGGGGCACTGGGAGGAGACCT 60.2 0.06
mm4__chr13 111.92 Mbp_chr13_111915156_F TCGTCGGCAGCGTCGGTGACTCAAGAGACCGTGG 60.0 0.06
mm4__chr13 111.92 Mbp_chr13_111915156_R GTCTCGTGGGCTCGGCTGAGATCTGCAGGCAGGTG 60.4 0.06
mm4__chr17 77.85 Mbp_chr17_77846538_F TCGTCGGCAGCGTCCCAGTGACCTACCATGAGCC 59.8 0.06
mm4__chr17 77.85 Mbp_chr17_77846538_R GTCTCGTGGGCTCGGAGAGGAAGCCCAGGACTTCA 60.1 0.06
mm4__chr7 1.41 Mbp_chr7_1412191_F TCGTCGGCAGCGTCGGGAATCACTTAAGCCCAGGT 59.7 0.06
mm4__chr7 1.41 Mbp_chr7_1412191_R GTCTCGTGGGCTCGGCATGGGTGGGGCTAAGACC 59.7 0.06
mm4__chr17 18.12 Mbp_chr17_18118841_F TCGTCGGCAGCGTCGGCGAAGGAGGAAGATGAGG 59.8 0.05
mm4__chr17 18.12 Mbp_chr17_18118841_R GTCTCGTGGGCTCGGCCTTCAGGCTCCGTTTGGG 60.6 0.05
mm4__chr2 128.51 Mbp_chr2_128512502_F TCGTCGGCAGCGTCAAGCATGGCTCCCAATCCTG 60.3 0.05
mm4__chr2 128.51 Mbp_chr2_128512502_R GTCTCGTGGGCTCGGAGTCCTGGGAGGTTAAGAGAAC 58.8 0.05
mm4__chr2 241.48 Mbp_chr2_241484300_F TCGTCGGCAGCGTCCAAAGGAGTTGCAGGGACCA 60.1 0.05
mm4__chr2 241.48 Mbp_chr2_241484300_R GTCTCGTGGGCTCGGTGCAGGAGAGAGGTAGGTGG 60.3 0.05
mm4__chr2 120.68 Mbp_chr2_120680361_F TCGTCGGCAGCGTCCTCAAGCCTCCAACACACCT 59.8 0.05
mm4__chr2 120.68 Mbp_chr2_120680361_R GTCTCGTGGGCTCGGACTCCACAGCAGTTCTTCCG 59.9 0.05
mm4__chr22 20.27 Mbp_chr22_20268454_F TCGTCGGCAGCGTCCATTCCTGAAGAGGCGGCG 61.1 0.05
mm4__chr22 20.27 Mbp_chr22_20268454_R GTCTCGTGGGCTCGGCCTCGGGACAAAGCCCTTG 60.6 0.05
mm4__chr4 3.64 Mbp_chr4_3640561_F TCGTCGGCAGCGTCCCGGGAGATTCAGCTCTGGA 61.0 0.05
mm4__chr4 3.64 Mbp_chr4_3640561_R GTCTCGTGGGCTCGGTGACCCCATGGCTTTGAGAC 59.9 0.05
mm4__chr19 9.81 Mbp_chr19_9811113_F Primer3: not found at this Tm N.d. 0.05
mm4__chr19 9.81 Mbp_chr19_9811113_R Primer3: not found at this Tm N.d. 0.05
mm3__chr15 43.99 Mbp_chr15_43990080_F TCGTCGGCAGCGTCGAGTCCTTCTGACCCATGCC 60.1 0.05
mm3__chr15 43.99 Mbp_chr15_43990080_R GTCTCGTGGGCTCGGTGTCGTCGACAATGGCTCTG 60.3 0.05
mm2__chr9 6.83 Mbp_chr9_6834533_F TCGTCGGCAGCGTCTGATATTGCTACGCCCGTCG 60.3 0.05
mm2__chr9 6.83 Mbp_chr9_6834533_R GTCTCGTGGGCTCGGACCCATGCCCACCATCATG 60.0 0.05
mm4__chr1 203.49 Mbp_chr1_203492381_F TCGTCGGCAGCGTCCATACAGCCCGCCAAATGTG 59.8 0.05
mm4__chr1 203.49 Mbp_chr1_203492381_R GTCTCGTGGGCTCGGCCACCTGGGAAAAGACACCA 59.8 0.05
mm4__chr10 24.95 Mbp_chr10_24952591_F TCGTCGGCAGCGTCTTTGCATTTACCACGACGCC 59.7 0.04
mm4__chr10 24.95 Mbp_chr10_24952591_R GTCTCGTGGGCTCGGCTTCGCCCTCCCTGCTCC 62.1 0.04
mm4__chr8 21.55 Mbp_chr8_21545332_F Primer3: not found at this Tm N.d. 0.04
mm4__chr8 21.55 Mbp_chr8_21545332_R Primer3: not found at this Tm N.d. 0.04
mm4__chr3 52.03 Mbp_chr3_52028639_F TCGTCGGCAGCGTCCCCTAGAACCTCCTGTCCCT 59.6 0.04
mm4__chr3 52.03 Mbp_chr3_52028639_R GTCTCGTGGGCTCGGGTCTCCATGGGTCCTTCTGC 60.1 0.04
mm3__chr1 223.86 Mbp_chr1_223864749_F TCGTCGGCAGCGTCTGACCCATGCTCACCATCAC 60.0 0.04
mm3__chr1 223.86 Mbp_chr1_223864749_R GTCTCGTGGGCTCGGCGCTCGTCATTGACAACAGC 60.1 0.04
mm4__chr8 143.32 Mbp_chr8_143317782_F TCGTCGGCAGCGTCGCTCCTGCAGAGTGATGGAG 60.1 0.04
mm4__chr8 143.32 Mbp_chr8_143317782_R GTCTCGTGGGCTCGGAGACGACCAGCCTGAACAAG 59.9 0.04
mm4__chr22 40.68 Mbp_chr22_40684126_F TCGTCGGCAGCGTCCCTGGGGAGCTCTTTATCACAA 59.7 0.04
mm4__chr22 40.68 Mbp_chr22_40684126_R GTCTCGTGGGCTCGGTTCAAGTTACGGGTGGCAGC 60.8 0.04
mm4__chr7 101.09 Mbp_chr7_101088443_F TCGTCGGCAGCGTCCACCTTCTTCGGCTGTCCTT 59.9 0.04
mm4__chr7 101.09 Mbp_chr7_101088443_R GTCTCGTGGGCTCGGCAGTCTTCGGCTCATCCTCC 59.8 0.04
mm4__chr21 19.53 Mbp_chr21_19526569_F TCGTCGGCAGCGTCAGCTGCTGTTTGTTACTTGGT 58.3 0.04
mm4__chr21 19.53 Mbp_chr21_19526569_R GTCTCGTGGGCTCGGACTGGCCTATAGTTCTTTCAGATT 57.4 0.04
mm4__chr1 25.08 Mbp_chr1_25084161_F TCGTCGGCAGCGTCACCACAGCATTAAGGCGACA 59.9 0.04
mm4__chr1 25.08 Mbp_chr1_25084161_R GTCTCGTGGGCTCGGTGAGTGGCACCAAGAATCCC 59.9 0.04
mm4__chr11 61.72 Mbp_chr11_61715448_F Primer3: not found at this Tm N.d. 0.04
mm4__chr11 61.72 Mbp_chr11_61715448_R Primer3: not found at this Tm N.d. 0.04
mm4__chr19 1.99 Mbp_chr19_1991619_F TCGTCGGCAGCGTCATGACCCGGACAAGAAACCC 59.9 0.04
mm4__chr19 1.99 Mbp_chr19_1991619_R GTCTCGTGGGCTCGGGTCCTCCAATGGGCTTTGGG 60.9 0.04
mm4__chr7 6.90 Mbp_chr7_6898349_F TCGTCGGCAGCGTCCCGTCCTGCTCCACTTCAG 60.0 0.04
mm4__chr7 6.90 Mbp_chr7_6898349_R GTCTCGTGGGCTCGGAGTGGGAGAGGAAAGGTGTT 58.1 0.04
mm4__chr4 9.74 Mbp_chr4_9736899_F TCGTCGGCAGCGTCAGTGGGAGAGGAAAGGTGTT 58.1 0.04
mm4__chr4 9.74 Mbp_chr4_9736899_R GTCTCGTGGGCTCGGCCGTCCTGCTCCACTTCAG 60.0 0.04
mm4__chr4 3.92 Mbp_chr4_3920778_F TCGTCGGCAGCGTCTTCATGGCGCTCCTACTGTG 60.1 0.04
mm4__chr4 3.92 Mbp_chr4_3920778_R GTCTCGTGGGCTCGGGCTGAGTGGGAGAGGAAAGG 59.7 0.04
mm4__chr3 75.39 Mbp_chr3_75389543_F TCGTCGGCAGCGTCCCTTCCTGCTCCACTTCAGA 59.0 0.04
mm4__chr3 75.39 Mbp_chr3_75389543_R GTCTCGTGGGCTCGGAGTGGGAGAGGAAAGGTGTT 58.1 0.04
mm4__chr3 130.05 Mbp_chr3_130053670_F TCGTCGGCAGCGTCCCATCCTGCTCCACTTCAGA 59.0 0.04
mm4__chr3 130.05 Mbp_chr3_130053670_R GTCTCGTGGGCTCGGAGTGGGAGAGGAAAGGTGTT 58.1 0.04
mm4__chr21 32.50 Mbp_chr21_32498742_F TCGTCGGCAGCGTCAGTGGGAGAGGAAAGGTGTT 58.1 0.04
mm4__chr21 32.50 Mbp_chr21_32498742_R GTCTCGTGGGCTCGGCCGTCCTGCTCCACTTCAG 60.0 0.04
mm4__chr2 218.99 Mbp_chr2_218985180_F Primer3: not found at this Tm N.d. 0.04
mm4__chr2 218.99 Mbp_chr2_218985180_R Primer3: not found at this Tm N.d. 0.04
mm4__chr13 29.17 Mbp_chr13_29165233_F Primer3: not found at this Tm N.d. 0.04
mm4__chr13 29.17 Mbp_chr13_29165233_R Primer3: not found at this Tm N.d. 0.04
mm4__chr1 39.90 Mbp_chr1_39902661_F Primer3: not found at this Tm N.d. 0.04
mm4__chr1 39.90 Mbp_chr1_39902661_R Primer3: not found at this Tm N.d. 0.04
mm2__chr5 138.25 Mbp_chr5_138252934_F TCGTCGGCAGCGTCCTGCTGCTGTCCTTTCCTCA 59.9 0.04
mm2__chr5 138.25 Mbp_chr5_138252934_R GTCTCGTGGGCTCGGTGCACGCTTCCCTTGATTCT 59.9 0.04
mm4__chr7 143.14 Mbp_chr7_143140944_F Primer3: not found at this Tm N.d. 0.04
mm4__chr7 143.14 Mbp_chr7_143140944_R Primer3: not found at this Tm N.d. 0.04
mm4__chr10 46.09 Mbp_chr10_46092296_F TCGTCGGCAGCGTCCACCCAGTCTCGTGCTGTC 60.3 0.03
mm4__chr10 46.09 Mbp_chr10_46092296_R GTCTCGTGGGCTCGGGTCCTGATCTCCACCTGTGC 60.1 0.03
mm4__chr9 137.62 Mbp_chr9_137615978_F TCGTCGGCAGCGTCGGAGGGTGCTTCCAGAAACA 59.8 0.03
mm4__chr9 137.62 Mbp_chr9_137615978_R GTCTCGTGGGCTCGGCTAGCCACAGTCACCCCTTC 59.7 0.03
mm4__chr16 62.75 Mbp_chr16_62746606_F Primer3: not found at this Tm N.d. 0.03
mm4__chr16 62.75 Mbp_chr16_62746606_R Primer3: not found at this Tm N.d. 0.03
mm4__chr1 10.90 Mbp_chr1_10902122_F Primer3: not found at this Tm N.d. 0.03
mm4__chr1 10.90 Mbp_chr1_10902122_R Primer3: not found at this Tm N.d. 0.03
mm4__chr7 101.05 Mbp_chr7_101050455_F Primer3: not found at this Tm N.d. 0.03
mm4__chr7 101.05 Mbp_chr7_101050455_R Primer3: not found at this Tm N.d. 0.03
mm4__chr12 52.18 Mbp_chr12_52180837_F TCGTCGGCAGCGTCTGAGGGCTTTGATTGGGCAT 59.9 0.03
mm4__chr12 52.18 Mbp_chr12_52180837_R GTCTCGTGGGCTCGGGAAGAAGGTAGCCTGCCCAG 60.1 0.03
mm4__chr4 145.73 Mbp_chr4_145734973_F Primer3: not found at this Tm N.d. 0.03
mm4__chr4 145.73 Mbp_chr4_145734973_R Primer3: not found at this Tm N.d. 0.03
mm4__chr19 12.89 Mbp_chr19_12887107_F TCGTCGGCAGCGTCAAGTCATCCTGTGTGTCCGG 59.6 0.03
mm4__chr19 12.89 Mbp_chr19_12887107_R GTCTCGTGGGCTCGGCGAGGAAGAGGAGGCTTGAG 59.5 0.03
mm3__chr2 237.88 Mbp_chr2_237882745_F TCGTCGGCAGCGTCCAAGGGTCTCCAGTAGCAGC 60.1 0.03
mm3__chr2 237.88 Mbp_chr2_237882745_R GTCTCGTGGGCTCGGGCGCCTCTCACCCTATTTGT 60.1 0.03
mm2__chr15 41.85 Mbp_chr15_41854120_F TCGTCGGCAGCGTCACAGATGACAGGCTGTGGC 60.0 0.03
mm2__chr15 41.85 Mbp_chr15_41854120_R GTCTCGTGGGCTCGGCCTCTCCCAGAACTTGGCTG 60.0 0.03
mm4__chr11 64.59 Mbp_chr11_64593635_F TCGTCGGCAGCGTCTGATGAACACGGGCACTCTC 60.0 0.03
mm4__chr11 64.59 Mbp_chr11_64593635_R GTCTCGTGGGCTCGGGTCATCACCAAGGGTCGGG 60.0 0.03
mm4__chr20 57.21 Mbp_chr20_57207241_F Primer3: not found at this Tm N.d. 0.03
mm4__chr20 57.21 Mbp_chr20_57207241_R Primer3: not found at this Tm N.d. 0.03
mm4__chr15 32.11 Mbp_chr15_32114918_F Primer3: not found at this Tm N.d. 0.03
mm4__chr15 32.11 Mbp_chr15_32114918_R Primer3: not found at this Tm N.d. 0.03
mm4__chr2 74.39 Mbp_chr2_74389884_F TCGTCGGCAGCGTCTGTCTAATATTGCTATGTGAAGCCT 58.1 0.03
mm4__chr2 74.39 Mbp_chr2_74389884_R GTCTCGTGGGCTCGGAAAGATGTCGGGCAGATGGG 60.1 0.03
mm4__chr3 184.77 Mbp_chr3_184773901_F TCGTCGGCAGCGTCCCCTTTGGCGAGTCACTGT 59.9 0.03
mm4__chr3 184.77 Mbp_chr3_184773901_R GTCTCGTGGGCTCGGCTCTCCCTTCAAGGCCTGTG 60.0 0.03
mm4__chr17 2.85 Mbp_chr17_2852412_F TCGTCGGCAGCGTCAGTGGTAACGGCTGCTTCAT 59.6 0.03
mm4__chr17 2.85 Mbp_chr17_2852412_R GTCTCGTGGGCTCGGTCTCCAATGCCCACAGCTTC 60.3 0.03
mm4__chr20 21.51 Mbp_chr20_21513366_F TCGTCGGCAGCGTCCTTTCACTCCCAGCGTCCAA 60.2 0.03
mm4__chr20 21.51 Mbp_chr20_21513366_R GTCTCGTGGGCTCGGGGGCCTTCAGTACTCCCGTA 60.6 0.03
mm4__chr8 4.54 Mbp_chr8_4540001_F Primer3: not found at this Tm N.d. 0.02
mm4__chr8 4.54 Mbp_chr8_4540001_R Primer3: not found at this Tm N.d. 0.02
mm4__chr8 42.80 Mbp_chr8_42801021_F Primer3: not found at this Tm N.d. 0.02
mm4__chr8 42.80 Mbp_chr8_42801021_R Primer3: not found at this Tm N.d. 0.02
mm4__chr16 19.67 Mbp_chr16_19668371_F TCGTCGGCAGCGTCTCACGGTCAATACCTTGGCA 59.3 0.02
mm4__chr16 19.67 Mbp_chr16_19668371_R GTCTCGTGGGCTCGGTGGAGAGAGAATGTGTGTGCA 59.3 0.02
mm4__chr17 32.49 Mbp_chr17_32486287_F TCGTCGGCAGCGTCACTCGGGAGGCCTCAGTAAA 60.2 0.02
mm4__chr17 32.49 Mbp_chr17_32486287_R GTCTCGTGGGCTCGGTCCCTCCTTCCACCTGACAT 59.8 0.02
mm4__chr17 28.03 Mbp_chr17_28032575_F TCGTCGGCAGCGTCGGAATTCTCCTGGGGCTCAG 59.8 0.02
mm4__chr17 28.03 Mbp_chr17_28032575_R GTCTCGTGGGCTCGGTGGGTGAGGCCAGACAAATC 59.9 0.02
mm3__chr5 98.34 Mbp_chr5_98338821_F TCGTCGGCAGCGTCGCTCCTCATCAACAAGGGCT 60.0 0.02
mm3__chr5 98.34 Mbp_chr5_98338821_R GTCTCGTGGGCTCGGTTTTGACCCATGCCCACCAT 60.1 0.02
mm4__chr16 50.61 Mbp_chr16_50614051_F TCGTCGGCAGCGTCTAAAATGCAGCTGGGAGGCA 59.9 0.02
mm4__chr16 50.61 Mbp_chr16_50614051_R GTCTCGTGGGCTCGGAATTCACTCACCCAGGGCAG 59.9 0.02
mm4__chrX 46.29 Mbp_chrX_46289027_F Primer3: not found at this Tm N.d. 0.02
mm4__chrX 46.29 Mbp_chrX_46289027_R Primer3: not found at this Tm N.d. 0.02
mm4__chr6 158.81 Mbp_chr6_158806150_F Primer3: not found at this Tm N.d. 0.02
mm4__chr6 158.81 Mbp_chr6_158806150_R Primer3: not found at this Tm N.d. 0.02
mm4__chr18 48.23 Mbp_chr18_48229012_F TCGTCGGCAGCGTCCAGAGCCTCGAACCATCTGG 60.1 0.02
mm4__chr18 48.23 Mbp_chr18_48229012_R GTCTCGTGGGCTCGGGACTGGGATCTGGCACTGTC 60.1 0.02
mm4__chr1 109.96 Mbp_chr1_109961224_F Primer3: not found at this Tm N.d. 0.02
mm4__chr1 109.96 Mbp_chr1_109961224_R Primer3: not found at this Tm N.d. 0.02
mm4__chr11 17.58 Mbp_chr11_17578272_F TCGTCGGCAGCGTCGAAACCAAGCAATGCCCAGG 60.0 0.02
mm4__chr11 17.58 Mbp_chr11_17578272_R GTCTCGTGGGCTCGGGAAGAAGATGGGAGCGGAGG 59.8 0.02
mm4__chr17 79.60 Mbp_chr17_79596224_F TCGTCGGCAGCGTCGGGAAACAATTGCACACGCT 59.9 0.02
mm4__chr17 79.60 Mbp_chr17_79596224_R GTCTCGTGGGCTCGGTCAGTTGGGCTCTGCATCAG 60.0 0.02
mm4__chr12 57.21 Mbp_chr12_57213518_F TCGTCGGCAGCGTCTTTCCTGCTTCGGCCACC 60.2 0.02
mm4__chr12 57.21 Mbp_chr12_57213518_R GTCTCGTGGGCTCGGATGTCAAGTCCAGTGCCACC 60.2 0.02
mm4__chr19 16.02 Mbp_chr19_16019305_F TCGTCGGCAGCGTCCAGCTGAGCCACCCTACAG 59.7 0.02
mm4__chr19 16.02 Mbp_chr19_16019305_R GTCTCGTGGGCTCGGCAAGTTCTGCTGCATCCCTG 59.1 0.02
mm4__chr12 106.50 Mbp_chr12_106498321_F Primer3: not found at this Tm N.d. 0.02
mm4__chr12 106.50 Mbp_chr12_106498321_R Primer3: not found at this Tm N.d. 0.02
mm4__chr11 1.40 Mbp_chr11_1396249_F Primer3: not found at this Tm N.d. 0.02
mm4__chr11 1.40 Mbp_chr11_1396249_R Primer3: not found at this Tm N.d. 0.02
mm4__chr11 1.40 Mbp_chr11_1396213_F Primer3: not found at this Tm N.d. 0.02
mm4__chr11 1.40 Mbp_chr11_1396213_R Primer3: not found at this Tm N.d. 0.02
mm4__chr10 13.71 Mbp_chr10_13707157_F Primer3: not found at this Tm N.d. 0.02
mm4__chr10 13.71 Mbp_chr10_13707157_R Primer3: not found at this Tm N.d. 0.02
mm3__chr18 76.67 Mbp_chr18_76674718_F TCGTCGGCAGCGTCCAGGTCTGAATCCCTGCTGG 60.1 0.02
mm3__chr18 76.67 Mbp_chr18_76674718_R GTCTCGTGGGCTCGGCGACCTTGAGAGCCTGTGG 60.0 0.02
mm2__chr18 62.44 Mbp_chr18_62442087_F TCGTCGGCAGCGTCCCTCGTCATCGACAATGGCT 60.1 0.02
mm2__chr18 62.44 Mbp_chr18_62442087_R GTCTCGTGGGCTCGGGAGTCCTTCTGACCCATGCC 60.1 0.02
mm4__chr16 1.79 Mbp_chr16_1788947_F TCGTCGGCAGCGTCCTCTGCAGCTGTGAGACGG 60.4 0.02
mm4__chr16 1.79 Mbp_chr16_1788947_R GTCTCGTGGGCTCGGGTCACCTGAGGACTGCAGAA 59.3 0.02
mm3__chr1 55.01 Mbp_chr1_55007156_F TCGTCGGCAGCGTCGAGCTACAGTGAGGACCACC 59.4 0.02
mm3__chr1 55.01 Mbp_chr1_55007156_R GTCTCGTGGGCTCGGCTGAGCCCTTGTGGATGACC 60.3 0.02
mm4__chr3 38.00 Mbp_chr3_38000563_F TCGTCGGCAGCGTCAGAGACAGAGAGCCAGACAGT 59.9 0.02
mm4__chr3 38.00 Mbp_chr3_38000563_R GTCTCGTGGGCTCGGTCCTGTCCCTGACTTTGTGC 59.8 0.02
mm4__chr6 29.68 Mbp_chr6_29675343_F TCGTCGGCAGCGTCGCTCTCCATCCTTTCAGGGG 59.8 0.02
mm4__chr6 29.68 Mbp_chr6_29675343_R GTCTCGTGGGCTCGGTCTCCCAAACACAGAAGGCC 59.8 0.02
mm4__chr7 50.66 Mbp_chr7_50663081_F TCGTCGGCAGCGTCTCTTTCAAAGGCCCACTCGC 60.8 0.02
mm4__chr7 50.66 Mbp_chr7_50663081_R GTCTCGTGGGCTCGGTGTCAGCTCTGAGGATGCAC 59.7 0.02
mm4__chr1 15.43 Mbp_chr1_15426387_F TCGTCGGCAGCGTCGCTCGAAGGTTCCTGGAAGT 59.6 0.02
mm4__chr1 15.43 Mbp_chr1_15426387_R GTCTCGTGGGCTCGGCCTAGCTCCTGTCTCGGAGT 60.1 0.02
mm4__chrY 26.12 Mbp_chrY_26118940_F TCGTCGGCAGCGTCCGAAAATGATGGGCCTGGGA 60.3 0.01
mm4__chrY 26.12 Mbp_chrY_26118940_R GTCTCGTGGGCTCGGGCTGACTAACACTTGGGGCT 59.9 0.01
mm4__chrY 23.55 Mbp_chrY_23551653_F TCGTCGGCAGCGTCCCACCCTGAGGCTGACTAAC 59.7 0.01
mm4__chrY 23.55 Mbp_chrY_23551653_R GTCTCGTGGGCTCGGGAGAGCCATTCTGGGAGGAC 59.5 0.01
mm4__chrY 22.64 Mbp_chrY_22644510_F TCGTCGGCAGCGTCCGAAAATGATGGGCCTGGGA 60.3 0.01
mm4__chrY 22.64 Mbp_chrY_22644510_R GTCTCGTGGGCTCGGGCTGACTAACACTTGGGGCT 59.9 0.01
mm4__chrY 21.94 Mbp_chrY_21941861_F TCGTCGGCAGCGTCCCACCCTGAGGCTGACTAAC 59.7 0.01
mm4__chrY 21.94 Mbp_chrY_21941861_R GTCTCGTGGGCTCGGGAGAGCCATTCTGGGAGGAC 59.5 0.01
mm4__chr6 105.63 Mbp_chr6_105630769_F Primer3: not found at this Tm N.d. 0.01
mm4__chr6 105.63 Mbp_chr6_105630769_R Primer3: not found at this Tm N.d. 0.01
mm4__chr17 44.97 Mbp_chr17_44968833_F TCGTCGGCAGCGTCCAGGTCTGCAGGGGACAAAG 60.6 0.01
mm4__chr17 44.97 Mbp_chr17_44968833_R GTCTCGTGGGCTCGGGGTCCCCTCCGTATCCTCTT 60.1 0.01
mm3__chr7 157.85 Mbp_chr7_157849865_F TCGTCGGCAGCGTCGGGGAGGCCAAACGTGTTAT 60.3 0.01
mm3__chr7 157.85 Mbp_chr7_157849865_R GTCTCGTGGGCTCGGATCTCATGTCGTCCCCAGGA 60.0 0.01
mm4__chr15 67.30 Mbp_chr15_67297568_F Primer3: not found at this Tm N.d. 0.01
mm4__chr15 67.30 Mbp_chr15_67297568_R Primer3: not found at this Tm N.d. 0.01
mm4__chr17 66.80 Mbp_chr17_66797790_F TCGTCGGCAGCGTCGACTGGTTGGGTCTGACCAC 60.2 0.01
mm4__chr17 66.80 Mbp_chr17_66797790_R GTCTCGTGGGCTCGGGCACTGTCTCCACCTCCAAA 59.8 0.01
mm4__chr2 25.33 Mbp_chr2_25332976_F TCGTCGGCAGCGTCCAAAGGCCACTCTCCGCTTA 60.0 0.01
mm4__chr2 25.33 Mbp_chr2_25332976_R GTCTCGTGGGCTCGGGACCCAGTAGCCTGCTCAAG 60.1 0.01
mm4__chr14 23.14 Mbp_chr14_23139516_F TCGTCGGCAGCGTCAAGCGACATTGGCAAAGACA 58.6 0.01
mm4__chr14 23.14 Mbp_chr14_23139516_R GTCTCGTGGGCTCGGCTTCCCCTCACCTCCTCTCC 60.6 0.01
mm4__chr8 72.27 Mbp_chr8_72268166_F Primer3: not found at this Tm N.d. 0.01
mm4__chr8 72.27 Mbp_chr8_72268166_R Primer3: not found at this Tm N.d. 0.01
mm4__chr1 36.43 Mbp_chr1_36430470_F Primer3: not found at this Tm N.d. 0.01
mm4__chr1 36.43 Mbp_chr1_36430470_R Primer3: not found at this Tm N.d. 0.01
mm4__chr3 122.07 Mbp_chr3_122067071_F TCGTCGGCAGCGTCCAAAGGTTCTAGGGGTGGGG 59.6 0.01
mm4__chr3 122.07 Mbp_chr3_122067071_R GTCTCGTGGGCTCGGAAACTGCCCTCACAACCCAT 59.8 0.01
mm3__chr19 33.41 Mbp_chr19_33406852_F TCGTCGGCAGCGTCGGTCTCGCCATTATCTAGCCA 59.3 0.01
mm3__chr19 33.41 Mbp_chr19_33406852_R GTCTCGTGGGCTCGGCTTTTGTGTTGCTCCTGGGC 59.9 0.01
mm4__chr11 62.77 Mbp_chr11_62766152_F TCGTCGGCAGCGTCTTCTGTGCTCTTCTGCCAGG 59.9 0.01
mm4__chr11 62.77 Mbp_chr11_62766152_R GTCTCGTGGGCTCGGGAGCACAGAACCAACCTCCA 59.8 0.01
mm4__chr2 716.99 Kbp_chr2_716994_F TCGTCGGCAGCGTCTGGGATAGAGGGTGGAAGGG 60.0 0.01
mm4__chr2 716.99 Kbp_chr2_716994_R GTCTCGTGGGCTCGGATCCCCAGCCTCATCTCCAT 60.1 0.01
mm4__chr7 1.30 Mbp_chr7_1302239_F TCGTCGGCAGCGTCTGAAGCCTGGGAGAAACCAC 59.8 0.01
mm4__chr7 1.30 Mbp_chr7_1302239_R GTCTCGTGGGCTCGGGACAGAGGATAACGGCCTGG 59.8 0.01
mm4__chr5 140.14 Mbp_chr5_140143532_F TCGTCGGCAGCGTCCCTGGGCAAAGGAGTATGGG 60.1 0.01
mm4__chr5 140.14 Mbp_chr5_140143532_R GTCTCGTGGGCTCGGAGGGCCAAAACTCTTCTGGG 59.8 0.01
mm4__chr2 54.63 Mbp_chr2_54633136_F Primer3: not found at this Tm N.d. 0.01
mm4__chr2 54.63 Mbp_chr2_54633136_R Primer3: not found at this Tm N.d. 0.01
mm3__chr16 17.65 Mbp_chr16_17652335_F TCGTCGGCAGCGTCGGCAAGCTATCCCCACCAAT 60.1 0.01
mm3__chr16 17.65 Mbp_chr16_17652335_R GTCTCGTGGGCTCGGTCTGCTTCAAAGACTGCCGA 59.6 0.01
mm4__chr10 131.72 Mbp_chr10_131722333_F TCGTCGGCAGCGTCCACAGATGCAGAGAGGAGGC 60.1 0.01
mm4__chr10 131.72 Mbp_chr10_131722333_R GTCTCGTGGGCTCGGGAGCAGGAGTGGGGAGGTA 59.9 0.01
mm4__chr4 84.31 Mbp_chr4_84312791_F TCGTCGGCAGCGTCACAGGTCTCTCCATCTCGCT 60.0 0.01
mm4__chr4 84.31 Mbp_chr4_84312791_R GTCTCGTGGGCTCGGCTAGTTGCCTTGTCCCTGGG 60.0 0.01
mm4__chr15 78.62 Mbp_chr15_78616686_F Primer3: not found at this Tm N.d. 0.01
mm4__chr15 78.62 Mbp_chr15_78616686_R Primer3: not found at this Tm N.d. 0.01
mm4__chr20 36.34 Mbp_chr20_36336015_F TCGTCGGCAGCGTCTCCTGTTTCTAAGCGCTGCT 59.6 0.01
mm4__chr20 36.34 Mbp_chr20_36336015_R GTCTCGTGGGCTCGGGCATGGACTGGATTGGCAAA 59.1 0.01
mm4__chr1 117.84 Mbp_chr1_117837571_F Primer3: not found at this Tm N.d. 0.01
mm4__chr1 117.84 Mbp_chr1_117837571_R Primer3: not found at this Tm N.d. 0.01
mm4__chr11 40.29 Mbp_chr11_40293456_F TCGTCGGCAGCGTCCAGATCCTCCAGGTGTTGCA 59.6 0.01
mm4__chr11 40.29 Mbp_chr11_40293456_R GTCTCGTGGGCTCGGCTCCCGGAGCCACTACCG 61.5 0.01
mm4__chr2 239.99 Mbp_chr2_239993896_F TCGTCGGCAGCGTCTTCAAGCCTGAACAGACGGC 60.8 0.01
mm4__chr2 239.99 Mbp_chr2_239993896_R GTCTCGTGGGCTCGGAGGTTGTGTGACTGTGTGGG 60.1 0.01
mm4__chr1 214.04 Mbp_chr1_214043657_F TCGTCGGCAGCGTCAGGCTGTATGGTCTGTCAAGC 60.0 0.01
mm4__chr1 214.04 Mbp_chr1_214043657_R GTCTCGTGGGCTCGGGTGCCTCCTCCTGTGAGTTC 60.0 0.01
mm4__chr1 115.69 Mbp_chr1_115685393_F Primer3: not found at this Tm N.d. 0.01
mm4__chr1 115.69 Mbp_chr1_115685393_R Primer3: not found at this Tm N.d. 0.01
mm3__chr1 202.87 Mbp_chr1_202873370_F TCGTCGGCAGCGTCTGACAATGGCTCCAGCACAT 59.9 0.01
mm3__chr1 202.87 Mbp_chr1_202873370_R GTCTCGTGGGCTCGGGGAGTCCTTCTGGCCTATGC 59.8 0.01
mm4__chr4 1.30 Mbp_chr4_1299336_F Primer3: not found at this Tm N.d. 0.01
mm4__chr4 1.30 Mbp_chr4_1299336_R Primer3: not found at this Tm N.d. 0.01
mm4__chr11 64.81 Mbp_chr11_64806180_F Primer3: not found at this Tm N.d. 0.01
mm4__chr11 64.81 Mbp_chr11_64806180_R Primer3: not found at this Tm N.d. 0.01
mm4__chr12 3.17 Mbp_chr12_3170602_F TCGTCGGCAGCGTCTGAGTCAGTTCTGTGTGGGG 59.2 0.01
mm4__chr12 3.17 Mbp_chr12_3170602_R GTCTCGTGGGCTCGGTTTTCAGCTGGGTAGGCCTG 59.9 0.01
mm4__chr3 50.29 Mbp_chr3_50294867_F TCGTCGGCAGCGTCATGTCGGACAAAGGCCTGG 60.0 0.01
mm4__chr3 50.29 Mbp_chr3_50294867_R GTCTCGTGGGCTCGGCCGCAACACTCAACTGCATT 59.6 0.01
mm4__chr11 257.68 Kbp_chr11_257677_F TCGTCGGCAGCGTCGGCCTCTCCTGTCATCATCC 59.6 0.01
mm4__chr11 257.68 Kbp_chr11_257677_R GTCTCGTGGGCTCGGCCACTTGGCCACCTTCTCTT 59.8 0.01
mm4__chr4 6.52 Mbp_chr4_6521615_F TCGTCGGCAGCGTCGAGTCGTCTCAGGAGCCCTA 60.1 0.01
mm4__chr4 6.52 Mbp_chr4_6521615_R GTCTCGTGGGCTCGGACCAGCTCCTGTGTAAGTGC 59.9 0.01
mm4__chr22 17.11 Mbp_chr22_17114252_F TCGTCGGCAGCGTCTTCTGTACCCGACGCTTTCC 60.0 0.01
mm4__chr22 17.11 Mbp_chr22_17114252_R GTCTCGTGGGCTCGGCTAGGATCTGGGAGAGGCGA 59.8 0.01
mm4__chr19 49.75 Mbp_chr19_49750638_F TCGTCGGCAGCGTCAAAGAGACCCAGAGAGCCCT 59.8 0.01
mm4__chr19 49.75 Mbp_chr19_49750638_R GTCTCGTGGGCTCGGTGCCTTCCAGCCATTAAGCA 59.9 0.01
mm4__chr5 39.51 Kbp_chr5_39507_F Primer3: not found at this Tm N.d. 0.01
mm4__chr5 39.51 Kbp_chr5_39507_R Primer3: not found at this Tm N.d. 0.01
mm4__chr3 196.02 Mbp_chr3_196023287_F Primer3: not found at this Tm N.d. 0.01
mm4__chr3 196.02 Mbp_chr3_196023287_R Primer3: not found at this Tm N.d. 0.01
mm4__chr16 642.27 Kbp_chr16_642275_F TCGTCGGCAGCGTCCCTGTCGAGGTGAGACGC 59.8 0.01
mm4__chr16 642.27 Kbp_chr16_642275_R GTCTCGTGGGCTCGGACATTTCCCCAAGGTCACCC 59.8 0.01
mm4__chr11 69.10 Mbp_chr11_69097791_F TCGTCGGCAGCGTCCTCCCATGGGTCCTTAAGCC 59.8 0.01
mm4__chr11 69.10 Mbp_chr11_69097791_R GTCTCGTGGGCTCGGGTGAGCCCAAGAACACCTGA 59.8 0.01
mm4__chr19 42.02 Mbp_chr19_42022356_F Primer3: not found at this Tm N.d. 0.01
mm4__chr19 42.02 Mbp_chr19_42022356_R Primer3: not found at this Tm N.d. 0.01
mm4__chr11 133.76 Mbp_chr11_133757352_F TCGTCGGCAGCGTCACAAGAGGCATTCGGACAGT 59.3 0.01
mm4__chr11 133.76 Mbp_chr11_133757352_R GTCTCGTGGGCTCGGCCCCAGTTCTTGCACCATCT 59.9 0.01
mm3__chr3 10.39 Mbp_chr3_10386982_F TCGTCGGCAGCGTCAAACCACAGATCTGGCCCTG 59.9 0.01
mm3__chr3 10.39 Mbp_chr3_10386982_R GTCTCGTGGGCTCGGGATGCAGCAGCCTGTACTCA 60.1 0.01
mm4__chr11 113.40 Mbp_chr11_113397905_F TCGTCGGCAGCGTCGCTGGGGATAGTCATGGCAA 59.8 0.01
mm4__chr11 113.40 Mbp_chr11_113397905_R GTCTCGTGGGCTCGGGAGATCAGTGGCGCAGTTCT 60.1 0.01
mm4__chr17 57.91 Mbp_chr17_57905476_F TCGTCGGCAGCGTCTCAGTTTAGCTGCACTGGGG 59.9 0.01
mm4__chr17 57.91 Mbp_chr17_57905476_R GTCTCGTGGGCTCGGAGCCTGTTTGGGGAATGTGA 59.5 0.01
mm4__chr12 132.31 Mbp_chr12_132309264_F Primer3: not found at this Tm N.d. 0.01
mm4__chr12 132.31 Mbp_chr12_132309264_R Primer3: not found at this Tm N.d. 0.01
mm4__chr14 68.92 Mbp_chr14_68915249_F Primer3: not found at this Tm N.d. 0.01
mm4__chr14 68.92 Mbp_chr14_68915249_R Primer3: not found at this Tm N.d. 0.01
mm4__chr4 174.40 Mbp_chr4_174403379_F Primer3: not found at this Tm N.d. 0.01
mm4__chr4 174.40 Mbp_chr4_174403379_R Primer3: not found at this Tm N.d. 0.01
mm4__chr11 113.35 Mbp_chr11_113348052_F Primer3: not found at this Tm N.d. 0.01
mm4__chr11 113.35 Mbp_chr11_113348052_R Primer3: not found at this Tm N.d. 0.01
mm4__chrX 31.39 Mbp_chrX_31390296_F Primer3: not found at this Tm N.d. 0.01
mm4__chrX 31.39 Mbp_chrX_31390296_R Primer3: not found at this Tm N.d. 0.01
mm4__chr13 73.18 Mbp_chr13_73181895_F Primer3: not found at this Tm N.d. 0.01
mm4__chr13 73.18 Mbp_chr13_73181895_R Primer3: not found at this Tm N.d. 0.01
mm4__chr11 77.21 Mbp_chr11_77207491_F TCGTCGGCAGCGTCAACTTACGGACAGCAGACGG 60.0 0.01
mm4__chr11 77.21 Mbp_chr11_77207491_R GTCTCGTGGGCTCGGCAGCCACTCCATGTAAGGGG 60.1 0.01
mm4__chr17 44.91 Mbp_chr17_44910382_F TCGTCGGCAGCGTCACAGGGCAGATGTCAAGCTC 60.0 0.01
mm4__chr17 44.91 Mbp_chr17_44910382_R GTCTCGTGGGCTCGGGGGTACTTCTAGGTGGGGCT 60.3 0.01
mm4__chr12 107.40 Mbp_chr12_107403010_F TCGTCGGCAGCGTCCTGTGCTATTGGGAGGTGGG 60.1 0.01
mm4__chr12 107.40 Mbp_chr12_107403010_R GTCTCGTGGGCTCGGTGAATGACTTGGGTCCGAGG 59.3 0.01
mm4__chr17 32.27 Mbp_chr17_32268944_F TCGTCGGCAGCGTCATGAGGGAAGCTAGGCAGGA 60.0 0.00
mm4__chr17 32.27 Mbp_chr17_32268944_R GTCTCGTGGGCTCGGGTTCCCCTCACCTACGGTCT 60.6 0.00
mm4__chr17 1.02 Mbp_chr17_1022823_F TCGTCGGCAGCGTCCAGATAGGCTCGGGCTGATG 60.0 0.00
mm4__chr17 1.02 Mbp_chr17_1022823_R GTCTCGTGGGCTCGGATGAGGCTTGGGGAACTTCG 60.0 0.00
mm4__chr12 52.00 Mbp_chr12_52003255_F TCGTCGGCAGCGTCGCCCCTCATTCCTGACAGAC 60.1 0.00
mm4__chr12 52.00 Mbp_chr12_52003255_R GTCTCGTGGGCTCGGTGGGTACTGTCACTGCTCCT 60.1 0.00
mm4__chr4 123.37 Mbp_chr4_123366097_F Primer3: not found at this Tm N.d. 0.00
mm4__chr4 123.37 Mbp_chr4_123366097_R Primer3: not found at this Tm N.d. 0.00
mm4__chr15 89.63 Mbp_chr15_89632845_F TCGTCGGCAGCGTCGGCTGGACCTCACTTCACTG 60.3 0.00
mm4__chr15 89.63 Mbp_chr15_89632845_R GTCTCGTGGGCTCGGCCATCCTGGCCAAGAAGGAG 60.1 0.00
mm4__chr4 107.57 Mbp_chr4_107574853_F Primer3: not found at this Tm N.d. 0.00
mm4__chr4 107.57 Mbp_chr4_107574853_R Primer3: not found at this Tm N.d. 0.00
mm4__chr15 67.29 Mbp_chr15_67294848_F Primer3: not found at this Tm N.d. 0.00
mm4__chr15 67.29 Mbp_chr15_67294848_R Primer3: not found at this Tm N.d. 0.00
mm4__chr16 88.99 Mbp_chr16_88993394_F TCGTCGGCAGCGTCCCTCACAGCCTCAGCACTTG 60.9 0.00
mm4__chr16 88.99 Mbp_chr16_88993394_R GTCTCGTGGGCTCGGGGAACCCTCATGTGAACCCC 60.3 0.00
mm4__chr12 124.85 Mbp_chr12_124849565_F TCGTCGGCAGCGTCCGTTAGTGACTTCCTCCGGC 60.4 0.00
mm4__chr12 124.85 Mbp_chr12_124849565_R GTCTCGTGGGCTCGGGGCCACGGAGATAGTTAGCA 59.2 0.00
mm4__chr15 69.40 Mbp_chr15_69400303_F TCGTCGGCAGCGTCGAGGCCAAGGCGAGTAACAT 60.1 0.00
mm4__chr15 69.40 Mbp_chr15_69400303_R GTCTCGTGGGCTCGGCACTGGCTCCATACCCCATC 59.8 0.00
mm4__chr13 83.61 Mbp_chr13_83605225_F Primer3: not found at this Tm N.d. 0.00
mm4__chr13 83.61 Mbp_chr13_83605225_R Primer3: not found at this Tm N.d. 0.00
mm4__chr4 16.56 Mbp_chr4_16564032_F TCGTCGGCAGCGTCCTTGCAGGGTTACAGCTGGG 60.9 0.00
mm4__chr4 16.56 Mbp_chr4_16564032_R GTCTCGTGGGCTCGGGCTGTGAGTCTTTTGAGTATCTGG 59.3 0.00
mm4__chr8 132.57 Mbp_chr8_132571536_F Primer3: not found at this Tm N.d. 0.00
mm4__chr8 132.57 Mbp_chr8_132571536_R Primer3: not found at this Tm N.d. 0.00
mm4__chr11 125.35 Mbp_chr11_125346873_F TCGTCGGCAGCGTCGTCAGGGGCCAGAAGACAG 59.7 0.00
mm4__chr11 125.35 Mbp_chr11_125346873_R GTCTCGTGGGCTCGGCAGAGCCCCGTTCATCTGAA 59.7 0.00
mm4__chr22 24.88 Mbp_chr22_24884678_F TCGTCGGCAGCGTCAGGCTTTTAATATCGGAATGTGAAT 57.1 0.00
mm4__chr22 24.88 Mbp_chr22_24884678_R GTCTCGTGGGCTCGGATTAGTCAAGCTGTGGGGCC 60.0 0.00
mm4__chr7 100.54 Mbp_chr7_100539351_F Primer3: not found at this Tm N.d. 0.00
mm4__chr7 100.54 Mbp_chr7_100539351_R Primer3: not found at this Tm N.d. 0.00
mm4__chr2 215.46 Mbp_chr2_215456194_F Primer3: not found at this Tm N.d. 0.00
mm4__chr2 215.46 Mbp_chr2_215456194_R Primer3: not found at this Tm N.d. 0.00
mm3__chr15 65.33 Mbp_chr15_65329054_F TCGTCGGCAGCGTCGTGGCCTCTGTGGTCTTCG 60.3 0.00
mm3__chr15 65.33 Mbp_chr15_65329054_R GTCTCGTGGGCTCGGCTTTCCCCAGCAGGATCCTG 60.1 0.00
mm4__chr12 48.18 Mbp_chr12_48184032_F TCGTCGGCAGCGTCCTCCGCTTCCCTCGGCTC 62.2 0.00
mm4__chr12 48.18 Mbp_chr12_48184032_R GTCTCGTGGGCTCGGGCAGACCGTCCTCCATTGAG 60.4 0.00
mm4__chr1 39.68 Mbp_chr1_39682384_F TCGTCGGCAGCGTCTCTTTTGCAGGGTGAGGTGG 60.1 0.00
mm4__chr1 39.68 Mbp_chr1_39682384_R GTCTCGTGGGCTCGGACCTGATGACCTCTCTGGCT 59.9 0.00
mm4__chr15 74.32 Mbp_chr15_74318598_F TCGTCGGCAGCGTCTTGTAGCAACAGTCCCTGGG 59.6 0.00
mm4__chr15 74.32 Mbp_chr15_74318598_R GTCTCGTGGGCTCGGAAGCTGTCAATGAGGCCTGG 60.3 0.00
mm4__chr17 33.26 Mbp_chr17_33261890_F Primer3: not found at this Tm N.d. 0.00
mm4__chr17 33.26 Mbp_chr17_33261890_R Primer3: not found at this Tm N.d. 0.00
mm4__chr16 2.52 Mbp_chr16_2523267_F TCGTCGGCAGCGTCTGAGCCGTCTGTGTTCTAGT 58.3 0.00
mm4__chr16 2.52 Mbp_chr16_2523267_R GTCTCGTGGGCTCGGCACACACCAAGAGAGGGACC 59.9 0.00
mm4__chr6 94.45 Mbp_chr6_94445959_F Primer3: not found at this Tm N.d. 0.00
mm4__chr6 94.45 Mbp_chr6_94445959_R Primer3: not found at this Tm N.d. 0.00
mm4__chr14 78.07 Mbp_chr14_78074932_F TCGTCGGCAGCGTCCAAACGTGGATTCAGCTGGC 60.1 0.00
mm4__chr14 78.07 Mbp_chr14_78074932_R GTCTCGTGGGCTCGGCCTCTCCTCCCCATCCCTG 60.4 0.00
mm4__chr16 88.63 Mbp_chr16_88632242_F Primer3: not found at this Tm N.d. 0.00
mm4__chr16 88.63 Mbp_chr16_88632242_R Primer3: not found at this Tm N.d. 0.00
mm3__chr1 23.53 Mbp_chr1_23534914_F Primer3: not found at this Tm N.d. 0.00
mm3__chr1 23.53 Mbp_chr1_23534914_R Primer3: not found at this Tm N.d. 0.00
mm4__chr8 10.96 Mbp_chr8_10961029_F Primer3: not found at this Tm N.d. 0.00
mm4__chr8 10.96 Mbp_chr8_10961029_R Primer3: not found at this Tm N.d. 0.00
mm4__chr2 10.28 Mbp_chr2_10277913_F Primer3: not found at this Tm N.d. 0.00
mm4__chr2 10.28 Mbp_chr2_10277913_R Primer3: not found at this Tm N.d. 0.00
mm4__chr19 42.21 Mbp_chr19_42207484_F TCGTCGGCAGCGTCAGCATCTCACCAGCTCCAAC 60.0 0.00
mm4__chr19 42.21 Mbp_chr19_42207484_R GTCTCGTGGGCTCGGCTGCAAAGGGCTGAGGCT 59.9 0.00
mm4__chr20 62.51 Mbp_chr20_62506962_F TCGTCGGCAGCGTCCCACATGTCCCAGAGGTGAC 60.0 0.00
mm4__chr20 62.51 Mbp_chr20_62506962_R GTCTCGTGGGCTCGGCTGGGTGGCTGCGCTTTC 61.7 0.00
mm4__chr9 134.05 Mbp_chr9_134051381_F TCGTCGGCAGCGTCTAGACCATGAGCTCCTCCCC 60.1 0.00
mm4__chr9 134.05 Mbp_chr9_134051381_R GTCTCGTGGGCTCGGCTTGGATGAGTGTGGCCTGT 59.9 0.00
mm4__chr5 138.35 Mbp_chr5_138345006_F TCGTCGGCAGCGTCAGTCCTAAGACCTGAGCCCC 60.3 0.00
mm4__chr5 138.35 Mbp_chr5_138345006_R GTCTCGTGGGCTCGGCTGAGAGTGAGCGGCAGTG 60.4 0.00
mm4__chr12 26.38 Mbp_chr12_26377883_F Primer3: not found at this Tm N.d. 0.00
mm4__chr12 26.38 Mbp_chr12_26377883_R Primer3: not found at this Tm N.d. 0.00
mm4__chr2 237.91 Mbp_chr2_237913486_F TCGTCGGCAGCGTCGAGAGACTCCAATACACAGGACA 59.2 0.00
mm4__chr2 237.91 Mbp_chr2_237913486_R GTCTCGTGGGCTCGGGGAACAGAGGAGAGAAGGGG 58.8 0.00
mm4__chr18 26.41 Mbp_chr18_26405334_F TCGTCGGCAGCGTCCTTGACTGCAGCCTCGCTT 60.6 0.00
mm4__chr18 26.41 Mbp_chr18_26405334_R GTCTCGTGGGCTCGGGCCCTGCTGGATAAGACCTC 59.8 0.00
mm4__chr1 18.66 Mbp_chr1_18664180_F Primer3: not found at this Tm N.d. 0.00
mm4__chr1 18.66 Mbp_chr1_18664180_R Primer3: not found at this Tm N.d. 0.00
mm4__chr3 15.08 Mbp_chr3_15075613_F TCGTCGGCAGCGTCCCCTGGCTTCACTCACTTGT 59.8 0.00
mm4__chr3 15.08 Mbp_chr3_15075613_R GTCTCGTGGGCTCGGTCCCTGCAGGAAAAGTTGCT 59.8 0.00
mm4__chr7 2.63 Mbp_chr7_2634566_F TCGTCGGCAGCGTCGCTGGGGAGTGGGCATCT 61.4 0.00
mm4__chr7 2.63 Mbp_chr7_2634566_R GTCTCGTGGGCTCGGGGGGCCAGAAATAGCAAAGG 58.8 0.00
mm4__chr11 62.63 Mbp_chr11_62626010_F TCGTCGGCAGCGTCGTTCCTACAGGCAAGGGCAT 60.0 0.00
mm4__chr11 62.63 Mbp_chr11_62626010_R GTCTCGTGGGCTCGGCGGGTGGTGATAATAGGGGC 59.9 0.00
mm4__chr1 10.83 Mbp_chr1_10834500_F TCGTCGGCAGCGTCGCCAGTGAATCCAGGGAGAC 60.1 0.00
mm4__chr1 10.83 Mbp_chr1_10834500_R GTCTCGTGGGCTCGGTATACCATGCAGTGCCACCC 59.8 0.00
mm4__chr11 64.83 Mbp_chr11_64832789_F TCGTCGGCAGCGTCAAAGGCAAGCATGGGAGGG 60.3 0.00
mm4__chr11 64.83 Mbp_chr11_64832789_R GTCTCGTGGGCTCGGATGAGGGCTTTCTGTCGGTG 60.0 0.00
mm4__chr8 11.59 Mbp_chr8_11592681_F Primer3: not found at this Tm N.d. 0.00
mm4__chr8 11.59 Mbp_chr8_11592681_R Primer3: not found at this Tm N.d. 0.00
mm4__chr1 201.56 Mbp_chr1_201560377_F TCGTCGGCAGCGTCTGGCTGCTGCTTCTTATGGA 59.3 0.00
mm4__chr1 201.56 Mbp_chr1_201560377_R GTCTCGTGGGCTCGGCTGGCAGGAGGGATATGCTG 59.9 0.00
mm4__chr1 219.93 Mbp_chr1_219928676_F TCGTCGGCAGCGTCGCAGTATCTGAACAGCCCGT 60.1 0.00
mm4__chr1 219.93 Mbp_chr1_219928676_R GTCTCGTGGGCTCGGCTCTCTGCACAGTCCTGTCC 59.7 0.00
mm4__chr15_KI270727v1_random 283.40 Kbp_chr15_KI270727v1_random_283401_F Primer3: not found at this Tm N.d. 0.00
mm4__chr15_KI270727v1_random 283.40 Kbp_chr15_KI270727v1_random_283401_R Primer3: not found at this Tm N.d. 0.00
mm4__chr15 21.99 Mbp_chr15_21993599_F Primer3: not found at this Tm N.d. 0.00
mm4__chr15 21.99 Mbp_chr15_21993599_R Primer3: not found at this Tm N.d. 0.00
mm4__chr15 21.56 Mbp_chr15_21556306_F Primer3: not found at this Tm N.d. 0.00
mm4__chr15 21.56 Mbp_chr15_21556306_R Primer3: not found at this Tm N.d. 0.00
mm4__chr15 20.98 Mbp_chr15_20982567_F Primer3: not found at this Tm N.d. 0.00
mm4__chr15 20.98 Mbp_chr15_20982567_R Primer3: not found at this Tm N.d. 0.00
mm4__chr15 45.14 Mbp_chr15_45144610_F Primer3: not found at this Tm N.d. 0.00
mm4__chr15 45.14 Mbp_chr15_45144610_R Primer3: not found at this Tm N.d. 0.00
mm4__chr10 80.26 Mbp_chr10_80263978_F TCGTCGGCAGCGTCACTGGAAACATAGGCTCTGGG 59.4 0.00
mm4__chr10 80.26 Mbp_chr10_80263978_R GTCTCGTGGGCTCGGTCTGACACTCCCCTCCCTTT 59.8 0.00
mm4__chr4 156.92 Mbp_chr4_156920010_F Primer3: not found at this Tm N.d. 0.00
mm4__chr4 156.92 Mbp_chr4_156920010_R Primer3: not found at this Tm N.d. 0.00
mm4__chr7 155.38 Mbp_chr7_155378790_F TCGTCGGCAGCGTCTCAGAGGAGAAGGATGGGGT 59.2 0.00
mm4__chr7 155.38 Mbp_chr7_155378790_R GTCTCGTGGGCTCGGCTGGGCTGTTCTCCAGGTTT 59.8 0.00
mm4__chr1 223.75 Mbp_chr1_223748065_F TCGTCGGCAGCGTCCCTCTGACCACAGGTTCCCT 60.8 0.00
mm4__chr1 223.75 Mbp_chr1_223748065_R GTCTCGTGGGCTCGGCCACGGGCCTATTAGCTCTG 59.9 0.00
mm3__chr17 50.15 Mbp_chr17_50152206_F TCGTCGGCAGCGTCTGCATCTCAGGCCTTTCTGC 60.6 0.00
mm3__chr17 50.15 Mbp_chr17_50152206_R GTCTCGTGGGCTCGGTGGAGTGGTAGGAGGGCTC 59.9 0.00
mm4__chr7 69.60 Mbp_chr7_69601000_F TCGTCGGCAGCGTCGCACCTGCAGCGTTGATTTT 60.3 0.00
mm4__chr7 69.60 Mbp_chr7_69601000_R GTCTCGTGGGCTCGGGACAGGTCCAGGCAAAGACA 59.8 0.00
mm4__chr7 151.08 Mbp_chr7_151081802_F TCGTCGGCAGCGTCGACACGTGGCAGTGGAGAA 59.9 0.00
mm4__chr7 151.08 Mbp_chr7_151081802_R GTCTCGTGGGCTCGGCTACCAAGGGCAGCTGCTAG 60.1 0.00
mm4__chr7 111.95 Mbp_chr7_111954635_F Primer3: not found at this Tm N.d. 0.00
mm4__chr7 111.95 Mbp_chr7_111954635_R Primer3: not found at this Tm N.d. 0.00
mm4__chr6 51.22 Mbp_chr6_51215864_F Primer3: not found at this Tm N.d. 0.00
mm4__chr6 51.22 Mbp_chr6_51215864_R Primer3: not found at this Tm N.d. 0.00
mm4__chr6 159.18 Mbp_chr6_159177632_F TCGTCGGCAGCGTCAATTTATGGGTGCTCTGGGG 57.5 0.00
mm4__chr6 159.18 Mbp_chr6_159177632_R GTCTCGTGGGCTCGGCACATCCATCAGAGGAGGCC 59.8 0.00
mm4__chr6 145.85 Mbp_chr6_145847289_F TCGTCGGCAGCGTCTCACACTTGCAGGTTTTATGACT 58.5 0.00
mm4__chr6 145.85 Mbp_chr6_145847289_R GTCTCGTGGGCTCGGCCAAGGTGTACAGTTGGAGCA 60.2 0.00
mm4__chr5 5.73 Mbp_chr5_5725804_F TCGTCGGCAGCGTCATCTGGGGCATGGAAATGGG 60.1 0.00
mm4__chr5 5.73 Mbp_chr5_5725804_R GTCTCGTGGGCTCGGTGCTGCTCTTGAAAAGGCAG 59.0 0.00
mm4__chr5 141.75 Mbp_chr5_141747456_F TCGTCGGCAGCGTCGAGAGCCTCCCAGCAAGAAA 59.6 0.00
mm4__chr5 141.75 Mbp_chr5_141747456_R GTCTCGTGGGCTCGGCTCCGACTCAGTCCACAAGC 60.3 0.00
mm4__chr3 53.72 Mbp_chr3_53718441_F TCGTCGGCAGCGTCCCCTCTTTCCCCTCCTGTTG 59.6 0.00
mm4__chr3 53.72 Mbp_chr3_53718441_R GTCTCGTGGGCTCGGGTACGAGGAGCCTTCCCAC 59.4 0.00
mm4__chr21 44.31 Mbp_chr21_44308371_F Primer3: not found at this Tm N.d. 0.00
mm4__chr21 44.31 Mbp_chr21_44308371_R Primer3: not found at this Tm N.d. 0.00
mm4__chr21 34.56 Mbp_chr21_34564449_F TCGTCGGCAGCGTCAAGGAAGGAATGCAGCCAGG 60.3 0.00
mm4__chr21 34.56 Mbp_chr21_34564449_R GTCTCGTGGGCTCGGTTTCACATCAGGCTCTGGGC 60.3 0.00
mm4__chr20 33.74 Mbp_chr20_33738858_F TCGTCGGCAGCGTCGAGAGTTGGTGGAGAGTGGC 60.0 0.00
mm4__chr20 33.74 Mbp_chr20_33738858_R GTCTCGTGGGCTCGGTCCATGCCTTCCCTTGTCAC 59.9 0.00
mm4__chr2 60.06 Mbp_chr2_60064516_F Primer3: not found at this Tm N.d. 0.00
mm4__chr2 60.06 Mbp_chr2_60064516_R Primer3: not found at this Tm N.d. 0.00
mm4__chr2 26.51 Mbp_chr2_26513730_F TCGTCGGCAGCGTCCCTTCCCAGGAGAGGATGGA 60.0 0.00
mm4__chr2 26.51 Mbp_chr2_26513730_R GTCTCGTGGGCTCGGGTCAGTGCCTCACCTCTGAC 60.0 0.00
mm4__chr2 106.51 Mbp_chr2_106508796_F Primer3: not found at this Tm N.d. 0.00
mm4__chr2 106.51 Mbp_chr2_106508796_R Primer3: not found at this Tm N.d. 0.00
mm4__chr19 23.28 Mbp_chr19_23283034_F TCGTCGGCAGCGTCTCAGGTACTTAGGAGGCCGA 59.3 0.00
mm4__chr19 23.28 Mbp_chr19_23283034_R GTCTCGTGGGCTCGGTGTGGCATTGATCTCCCTGG 59.7 0.00
mm4__chr19 18.43 Mbp_chr19_18434048_F TCGTCGGCAGCGTCTATTTCACCGTCCCGATCCC 59.2 0.00
mm4__chr19 18.43 Mbp_chr19_18434048_R GTCTCGTGGGCTCGGTGGGTCCTGGGCAGACAT 60.2 0.00
mm4__chr17 58.12 Mbp_chr17_58115817_F Primer3: not found at this Tm N.d. 0.00
mm4__chr17 58.12 Mbp_chr17_58115817_R Primer3: not found at this Tm N.d. 0.00
mm4__chr17 56.29 Mbp_chr17_56290561_F TCGTCGGCAGCGTCACTGGCACATTTGAGTTGCAG 59.6 0.00
mm4__chr17 56.29 Mbp_chr17_56290561_R GTCTCGTGGGCTCGGACTCAACTCTTCACTGGGCTC 59.6 0.00
mm4__chr17 46.84 Mbp_chr17_46842052_F TCGTCGGCAGCGTCCGCTCCTGCAGAAGGCTG 60.8 0.00
mm4__chr17 46.84 Mbp_chr17_46842052_R GTCTCGTGGGCTCGGGGTGTGAGAAGGCAAGTGGT 60.1 0.00
mm4__chr16_KI270728v1_random 1.02 Mbp_chr16_KI270728v1_random_1015081_F TCGTCGGCAGCGTCTTACTTGGGCACAGCAGCAT 60.2 0.00
mm4__chr16_KI270728v1_random 1.02 Mbp_chr16_KI270728v1_random_1015081_R GTCTCGTGGGCTCGGCTCTGTCCTGCAGCTGTACC 60.1 0.00
mm4__chr16 33.12 Mbp_chr16_33115624_F TCGTCGGCAGCGTCCTCTGTCCTGCAGCTGTACC 60.1 0.00
mm4__chr16 33.12 Mbp_chr16_33115624_R GTCTCGTGGGCTCGGTTACTTGGGCACAGCAGCAT 60.2 0.00
mm4__chr16 32.75 Mbp_chr16_32754760_F TCGTCGGCAGCGTCTTACTTGGGCACAGCAGCAT 60.2 0.00
mm4__chr16 32.75 Mbp_chr16_32754760_R GTCTCGTGGGCTCGGCTCTGTCCTGCAGCTGTACC 60.1 0.00
mm4__chr16 32.17 Mbp_chr16_32174644_F TCGTCGGCAGCGTCCTCTGTCCTGCAGCTGTACC 60.1 0.00
mm4__chr16 32.17 Mbp_chr16_32174644_R GTCTCGTGGGCTCGGTTACTTGGGCACAGCAGCAT 60.2 0.00
mm4__chr15 72.36 Mbp_chr15_72361899_F Primer3: not found at this Tm N.d. 0.00
mm4__chr15 72.36 Mbp_chr15_72361899_R Primer3: not found at this Tm N.d. 0.00
mm4__chr14 67.78 Mbp_chr14_67780207_F TCGTCGGCAGCGTCCAGCCAGCTAAGGGGTTGTA 59.3 0.00
mm4__chr14 67.78 Mbp_chr14_67780207_R GTCTCGTGGGCTCGGGCAGACCTTGAGGAGCTGTT 59.9 0.00
mm4__chr14 101.96 Mbp_chr14_101964855_F TCGTCGGCAGCGTCCGTGTCGGTGCTGCAGAA 60.6 0.00
mm4__chr14 101.96 Mbp_chr14_101964855_R GTCTCGTGGGCTCGGAGGAACTTGCGCATCTGCT 60.0 0.00
mm4__chr1 53.74 Mbp_chr1_53739570_F TCGTCGGCAGCGTCGGGCAGGATCCTCCCTTCT 60.3 0.00
mm4__chr1 53.74 Mbp_chr1_53739570_R GTCTCGTGGGCTCGGACTTTCGCATCTGTCCGCTT 60.3 0.00
mm4__chr1 36.13 Mbp_chr1_36130606_F Primer3: not found at this Tm N.d. 0.00
mm4__chr1 36.13 Mbp_chr1_36130606_R Primer3: not found at this Tm N.d. 0.00
mm3__chr5 135.48 Mbp_chr5_135482445_F TCGTCGGCAGCGTCTGAGATCTTCAGAGGCAAGGC 59.7 0.00
mm3__chr5 135.48 Mbp_chr5_135482445_R GTCTCGTGGGCTCGGGCTGAGCAGAGATGATGACAGT 60.1 0.00
mm3__chr22 17.11 Mbp_chr22_17110848_F Primer3: not found at this Tm N.d. 0.00
mm3__chr22 17.11 Mbp_chr22_17110848_R Primer3: not found at this Tm N.d. 0.00
mm1__chr5 77.78 Mbp_chr5_77784965_F TCGTCGGCAGCGTCCTCGTCATTGACAACGGCTC 59.2 0.00
mm1__chr5 77.78 Mbp_chr5_77784965_R GTCTCGTGGGCTCGGAATCCTTCTGACCCATGCCC 59.7 0.00

Off-target amplicon sequences

Primers underlined, off-targets in bold.

ontarget_mm0__chr7 5.53 Mbp_chr7_5529555 CTCCCCTACCTGGTGCCTGGGGCGCCCCACGATGGAGGGGAAGACGGCCCGGGGGGCATCGTCGCCCGCGAAGCCGGCCT
TGCACATGCCGGAGCCGTTGTCGACGACGAGCGCGGCGATATCATCATCCA
mm2__chr22 15.72 Mbp_chr22_15721565 GTGCTCGTCATTGACAACGGCTCTGGCATGTGCAAGGCCGGCTTTGCAGGTGACGATGCCCCCCGGGCTGTCTTCCCTTC
CATC
GTGGGGTGCCCCAGGCACCAGAACATGAT
mm2__chr2 131.26 Mbp_chr2_131263634 GTGCTCGTCATTGACAACGGCTCTGGCATGTGCAAGGCCGGCTTTGCGGGCGACGATGCCCCCCGGGCTGTCTTCCCTTC
CATC
GTGGGGCGCCCCAGGCAGCAGGGCATGATGGGGGGCATGCATCAGAAAGAG
mm2__chr2 130.66 Mbp_chr2_130656828 GTGCTCGTCATTGACAACGGCTCTGGCATGTGCAAGGCCGGCTTTGCGGGCGACGATGCCCCCCGGGCTGTCTTCCCTTC
CATC
GTGGGGTGCCCCAGGCAGCAGGGCATGATGGGGGGCATGCATCAGAAAGAG
mm2__chr2 130.46 Mbp_chr2_130463841 CTCTTTCTGATGCATGCCCCCCATCATGCCCTGCTGCCTGGGGCGCCCCACGATGGAAGGGAAGACAGCCCGGGGGGCAT
CGTCGCCCGCAAAGCCGGCCTTGCACATGCCAGAGCCGTTGTCAATGACGAGCAC
mm2__chr2 130.08 Mbp_chr2_130075269 CTCTTTCTGATGCATGCCCCCCATCATGCCCTGCTGCCTGGGGCGCCCCACGATGGAAGGGAAGACAGCCCGGGGGGCAT
CGTCGCCCGCAAAGCCGGCCTTGCACATGCCAGAGCCGTTGTCAATGACGAGCAC
mm2__chr14 19.40 Mbp_chr14_19402806 ATCATGTTCTGGTGCCTGGGGCACCCCACGATGGAAGGGAAGACAGCCCGGGGGGCATCGTCACCTGCAAAGCCGGCCTT
GCACATGCCAGAGCCGTTGTCAATGACGAGCAC
mm2__chr14 19.00 Mbp_chr14_18998946 GTGCTCGTCATTGACAACGGCTCTGGCATGTGCAAGGCCGGCTTTGCAGGTGACGATGCCCCCCGGGCTGTCTTCCCTTC
CATC
GTGGGGTGCCCCAGGCACCAGAACATGAT
mm1__chr5 131.66 Mbp_chr5_131660014 ATGCCCATCATCACACCCTGGTGCCTCGGGTGCCCCATTATGGAGGGGAAGACGGCCCGGGGGCATCGTTGCCCGTGAAG
CAGACCTTCCACA
mm0__chr11 1.80 Mbp_chr11_1803993 CGCCACCCACATAGAAGTCCTTCTGACCCATGCCCACCGTCATGCCCTGGTGTCTGGGGCACCCCACGATGGAGGGGAAG
ACGGCCCAGG
GGGCATCGTCGTCGGTGAAGCTGGCCTTGCACATGCCAGAGGTGTT
mm2__chr2 73.90 Mbp_chr2_73901393 AGGCTTCGCAGGAGATGATGCCCCCCGGGCTGTCTTCCCCTCCATTGTGGGCCGCCCTCGCCACCAGGTGCGTGCTCATC
TGGATA
mm1__chr3 175.98 Mbp_chr3_175978477 GAGTCCTTCTGACCCATGCCCACCATCACACCTTGGTGCCTGGGGCGCCCCACGATGGATGGGAAGACGGCCCCGGAGGC
ATCGTCGCCTGCGAAGCTGGTCTTGCACATACAGGAGCCTTTGC
mm4__chr22 49.33 Mbp_chr22_49333612 GAACCTCCCACTTTCTCCGGCCGTTCTCCCTCCCTAGCAGCCTCCTAAGGGGACCGCACTTGCTCAGGTATCTCCCGGGG
CCGTTTTCCTGTTCATC
TCAGACTTGTCAAAATGTTCACGCAGCTTCCAAAG
mm4__chr10 88.95 Mbp_chr10_88948822 CTCACCTGATGTCTGGGACGTCCCACAATGGATGGGAAAACAGCCCTGGGAGCATCGTCCCCAGCAAAGCCGGCCTTACA
GAGCCCAGAGCCATTGTCACACACCAAGGCAGT
mm3__chr5 80.30 Mbp_chr5_80302745 CTCTTGCTCTGGGCCTCATCCACATAGGAGTCCTTCTGACCCATGCCCACCATCATGCCCTGGTGCCATGATGAAGGGGA
AGGCAGCCCGGG
GGACACCATCGCTCGCAAAGCTAGCCTTGCATATGCCA
mm4__chr16 79.36 Mbp_chr16_79357644 GCATCCGGGAAAGTTTGCAGTTACTGGAGTGACTTTGCTAATTACTGTCAGTCTCTGTCTTTGAACATCATGTGGGTTGG
GACCATGGCTGTCTTCCTCACCATCGGTTCCCTAGCAGGCATTGGCACTGCTTGGACTG
mm4__chrX 25.02 Mbp_chrX_25015360 CCTAAGCGAAAACGGGCCTTTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCCCTGGCTAGATGTTTAACGCTCTT
TGAGGCAGCA
mm3__chr5 57.48 Mbp_chr5_57482602 ATCTCCCACGTAGCAGTCCTTCTGGCCCATGCCTACCATAACGCCCTGGTGTCGAGGACGCCCTATCATGGAGGGGAACA
CAGCCCGGG
GGGCATCGTCACCACCAAAGCCTGCCTTGCACATCCCTGACCCAT
mm4__chr20 37.44 Mbp_chr20_37439358 CTTCTCCACACCCGTTCCTCCCTCACCCCTCCAGCGTCAGCCAGCCCTGGGCTGTGTTCTCTTCCATCTGCGCCCCTCCA
CGCATACCCCCTCCCCGGGCCAGGCCGCCCACCTGTGGGGCTTCTGAGATTCCC
mm4__chr2 131.63 Mbp_chr2_131626217 GTGCTCGTCATTGACAACGGCTCTGGCATGTGCAAGGCCGGCTTTGCGGGCGACGATGCCCCCCAGGCTGTCTTCCCTTC
TATC
GTGGGGCGCCCCAGGCACCAGGGCATGATGGAGGGCATGCATCAGAAGGAGT
mm2__chr6 88.28 Mbp_chr6_88276905 GAGTCCTTCTGACCCATGCCCACCATCACTCCCTGGTGCCTAGGGTGCCCCACAATGGAGGGGAAGACGGCCTGGGGAGC
CTTGCGCATGCTGGAGCAGTTGTCGACGACGACGAGCGCGGTGATAGCATCATCCA
mm4__chr16 78.29 Mbp_chr16_78289077 TCTCGGTTAACACAAGGCGTGCCAACAGCTGGTAGAGCGAGAGTCAGGGTGCCAGGCTGAAATGGAGTGGAAGGCAGCCC
TGG
CTGGAAGTCTTGCTGGGAACCTGGAGCGCTGGGAGGTAAAACT
mm4__chr20 64.20 Mbp_chr20_64202891 GAAAAGAGGCTCGGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACAACTCTGGCCCTGAGCACCCAGAGGACATCA
GGAAATAAGAGCTGAGTGTGCTTGCAGGTGAACTG
mm4__chr14 104.89 Mbp_chr14_104886980 GGACTTCCACTCCCAGGACACCCACCTGATCTTGAAGGAGACGGAGACGGCCCTGGCGGCCCTGGAGGCCCGACTCCTCT
CTAATTCTGTGGATGCCGAGTGTG
mm4__chr18 13.21 Mbp_chr18_13213299 GGCAGAGTGAGGACAAACCACACTCACGGGGACACCTGGAGCCCTTGAGGACAGGGCAGCCTGGGCCGTCTCACACTCCT
TC
AACCTCAGGGATACTGGTGACCTGAGGACGA
mm4__chr11 19.06 Mbp_chr11_19056165 ACTGAGGTACACCAGGCAATTTATAATCTGGAAGCAGAGGAAGAGGAAGTCGGCCCCGGCCAGGCTGAGGACGTAGACAG
AGAAGGCG
mm4__chr2 240.70 Mbp_chr2_240698181 TGCCTTCTCTTGCAGGGATGGTCCTGGCTGTGCTGCTGCACCAGGGCCGCCTTCCCCACCTTTTCCAGAGGAACCTGTTC
TACGGCC
mm4__chr2 240.68 Mbp_chr2_240676696 GGCCGTAGAACAGGTTCCTCTGGAAAAGGTGGGGAAGGCGGCCCTGGTGCAGCAGCACAGCCAGGACCATCCCTGCAAGA
GAAGGCA
mm4__chr4 8.24 Mbp_chr4_8240525 TGAGTGGGGTGTAGGGACAATCAGGAATCCTTCCAGGGGGTGCCAGGGCCGTCTCCACCTCCTGCAGCTGAGCCCACAGC
AGTGTCACAGGCTTCGGGGCTCATGGGGTGAGCCAGCATTGGCCGGACATGTGGAAT
mm3__chrX 53.14 Mbp_chrX_53143810 CATGGCCCATGTAGGAGTCCTTCTGGCCCATGCCCACCATCACACCCTGGTGCCGGGGTCACCTGATGATGGAGGGGAAC
ACAGCTCAGG
GGCCATCCATCCCCAGCAAAGCCAGCTTTGCACATGCCAGAG
mm2__chr3 12.07 Mbp_chr3_12070303 TCATTGACAGTGTCTCCGGCATGTACAAAGCTGGATTTGCTGGGGACGACGCCCCCTGAGCCGTGTTCCCCTCCATCCTT
AGGCGCCCCTGGCACCAGGGCACGATGGTGGGCATGGGTCAGAAGGACTC
mm3__chr20 61.06 Mbp_chr20_61057787 TGAACGACACTCCAGGAAGCTCAGCGGGCTGGGAGCCAGGACCTCGCACACTGGAAGGGGGGTTCCCAGTGCCCAGAGCT
GTCTGCCCCTCCATC
AGCCCCTGAGCTGACTGTCTTTGCTTTCCTGGGGAGTCGATC
mm4__chr17 81.51 Mbp_chr17_81512252 CCATCCACTCACCTGGTGTCTGGGGCGCCCGACGATGGAAGGAAACACGGCTCGGGGAGCGTCGTCCCCAGCAAAACCAG
CTTTGCACATGCCGGAGCCATTGTCAATGACCAGCGCGGCGATCTCTTCTTCCAT
mm4__chr2 46.98 Mbp_chr2_46983265 CTTGGACCACTTGTGCCAGAGATGGGGCTGAGGACGGCCCGGGGCACTGAGAAGCACAGCTGCCTCGCTCCACCTCCACC
ATCTGCTTTTTTGATCCTTTTTCGGTTGCTGAGCTTTGGTTT
mm4__chr5 170.37 Mbp_chr5_170365652 TCTGCTCCATTCAGCCAAGGGGCTCCTCTGGGAGGGCATGAAGTGAGCAGTCACCAGCGAAGGCATCTGGGGGCTGCAGA
CGCAGCTGGCTTCCATGGCTGTGTTCCCCTCCAGCCCTTGAGGATCCAGGACTTTC
mm4__chr9 131.56 Mbp_chr9_131555003 GCCCAGCTCTACCCAGCCGCGCCCACGCCGCCCGCGCTCTTCTCGCCGCCCGCCGGGGCCGCCTTCCCCTTCCCCGTGGT
GAGTGGCCGCCGCCCTGGGCGCGCTCCCCTCCGTGCTGTCT
mm4__chr1 112.79 Mbp_chr1_112794884 AGCTATCTGCAAGGCCACTGGCTATGAAAGTAACAAGTTCCCTTTAGTGTGAAGAGGACTCTAGGACTTCACACTGTTTA
GGGGGAGCAGAAGACGGCCCTGGGGAATGCAAGAAGTTTCTCTGCT
mm4__chr5 141.75 Mbp_chr5_141748840 ATCCCTGAGGTTTGCCCATCCAGCCTTTTACCCACCTTTATCGCCTACTCCTTGGTCAGTAGCTCCAAACCTCCTGGGCC
GGCTTTCCCTGCATA
AAAATCGTGCCTCTAACACTTGAAATGTGGGAAGTGAGAGCCAGA
mm4__chr20 62.91 Mbp_chr20_62910879 CCTCACATTCAGGCTTCGGTCGGCCCAAGTCTCCAGGCTCCTCATCTTTGATGTCCTGAGCCGCCTTTCCCTCCAACTTA
CTCTCTCTGTCATCTTTCCCAGCCTGG
mm4__chr20 24.82 Mbp_chr20_24818639 GGGCTTGGTGTGGATCATCACAGCCCCGTAACTGAGGGACGGAGGTGGAGACGACCCAGGAATAAACCACAAAGTGAATG
GGCTCCAGGTGGCTCCATCGAGAGCCATGAGTCC
mm4__chr19 33.72 Mbp_chr19_33719605 CCTAGGGAGACTGGACTGCAGCCCCAGGGCTGACTTCCCAGCCATCTGACCAGAGGGAATGGAAGGCAG
mm4__chr1 182.60 Mbp_chr1_182604226 AAGCAGTTGGACAACCTCCCCTTACCTCTCCAGGCAGGTGGTGGGGAAGGCGGCCAGGGTGCGGCACATGGCTGCGGGCG
CAGGGCAGCACGTAGTAGGCAGGATGGTGGC
mm4__chr11 45.40 Mbp_chr11_45400204 AGGCCCTCACTCCTCAAGGAGGATGAGGGGAAAGAAGGCCCTGGAATTGGGGCCCCTGAAAGCACTGCCATGGCAGTGCT
TGGCAATGGCATT
mm4__chr17 43.81 Mbp_chr17_43810326 GGGTGTGCAGGAGTGGAAATGTTTTTGAAGCACTTCCCAGGGCCGTGTCTCCCTCCCTCTTTTTCCCCTTTAAACTGCTC
TCCTCACTGCC
mm4__chr5 4.58 Mbp_chr5_4579560 CTACCTGGGCAGTGCAGACACCAGCACCTGGCCCTCTGCTCTGTGGGAGGGGAGGGCGGCCCAGGCCACCAAGCAATCAC
ATATGACAGTGGAGGGAGCCCACGTGCAACTCTCCTCTCTATCAACCTCCCTGGACGC
mm4__chr6 36.79 Mbp_chr6_36793235 AGCTATTGGAGGGAGAGGCTCTCAAACAGAGGAGGCAGGGGAGGAAGGGAAGCCGGCCCTGGAGGGCTGGCAGGACAGCC
CAGATCTCTCCAAATCAGGTGAGCAGAGCGG
mm3__chr11 66.37 Mbp_chr11_66366165 CACCCTGACACTCACTCCACTTCCCAGGACTGGTGGAGCTGGTCACCATGGCTGTGATGGCGGGGAAGACGGACAGGGTG
ACTGTGAAGACCAACACAAGGCAC
mm4__chr12 131.44 Mbp_chr12_131437132 GGCTCAGGAAAGCTGCTCACAGCTGCAGCCAGCCCGGCCCCCCGCCCTCACCTGCTCCCCCTGCTGTCTCCAGAGTCCCT
GGGCTTTCTCCCCCTCCACC
TGTTTCCTCTCCTTGGGCTG
mm4__chr17 73.45 Mbp_chr17_73446827 CTCTGGGATTTGGGCCTACGCTGCTCCTGGGCTGTCCACCCCTCCCTCCTTCTCTGTCTTGGGAATGGAGTATGGAGGGA
GGGGCTCGTCCAGTAGGGAGAACCAGGCCAGAA
mm4__chrX 102.37 Mbp_chrX_102366260 ACAAGAAGCAGCACTGGGAGCCCAGGCTCCAGGGCTTTCTTCCTCTCCCTCCCTCCCCTTTGCCCAAGTCACCATG
mm4__chrX 102.32 Mbp_chrX_102320831 ATGGTGACTTGGGCAAAGGGGAGGGAGGGAGAGGAAGAAAGCCCTGGAGCCTGGGCTCCCAGTGCTGCTTCTTGT
mm4__chrX 101.84 Mbp_chrX_101838996 TCCCTTTTCTCCAGTGCCACAAGAAGCAGCACTGGGAGCCCAGGCTCCAGGGCTTTCTTCCTCTCCCTCCCTCCCCTTTG
CCCAAGTCACCATGGAAGGCTCTG
mm3__chr12 113.81 Mbp_chr12_113812639 CAATTATGGGGAAGTGGGGCTTATTAAGGAAGCTGGAGGGGAATGCGGCCCTGGCTTCTAGCAATGCTATAATTAGATTG
CAGGGCCCCTTTTACTT
mm4__chr15 77.50 Mbp_chr15_77496945 TCCGACACAGACAGATCCCTGGCCTTATTTCGCAAGAGAGTGATAGAGCCCATTTCCAGATGTGCGGGAGGACGGCCCGG
G
ACCCAGTGCTGGCAGGAGAGCTGGCGCCCTCTGCTGTCCCGGCTAGGAAACAC
mm3__chr2 19.80 Mbp_chr2_19799442 GCCGAAGAGTCCAAAACAGCATAATGGGTGCTATGATGGAAGGGAAGAAGGCTCCGGGGGAGGGACAAGGGAGAGGAGT
mm4__chr1 161.05 Mbp_chr1_161052589 AGACCTCCACTTCCTGACCTTCAAAGACCCCTTCCTCCTACAAAGAATGGAGGGGCATAATTGGAGGTTGGAACATGAAG
GTCGGTGCAGGGGAGGAAGGCCCAGGAAGGAGGCCTTACTTGTGCTCTGC
mm4__chr15 44.40 Mbp_chr15_44403032 TATGAGGCAGACAAGCAGGCTGAGCTGGCTTACAATGAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGGTGA
GCGTGGGCCTGGCCTCCATGCTATAACC
mm4__chr4 42.27 Mbp_chr4_42272726 CCCAATGAGTGTGCTGTTGGAAAGGAAACCATGTTGATTTTTCTTCTGGAAGGAGGGGAATACAGCTCTGGAAATTCCTG
CTTCATTCTAAATAGGATCAAATGCAAAAACCAGGGACAAGAGTGAA
mm4__chr11 64.76 Mbp_chr11_64759197 AACTAGGATGCTGCCAGTGCCTGGTCTCCCAGTTTCCTGGGTCCCCTCCTGGGCCGTCTGCCCGCCCCTCCCCCACTCCC
CACCGAGGCGTGTCAGGTTGCTGACATTTACCAGTGACCCCACCGGACACTTGATCTC
mm3__chr16 8.32 Mbp_chr16_8318065 GCCCCAAAGCATGAATGTGGAAAACCCACCCTGGCCGTCGTCCCCTCCTTCTTTGTCTTCTAGAGTCTCTGTGGCCATTT
GTTTCTTATTTGCCAGCCACATTGAACA
mm3__chr15 34.79 Mbp_chr15_34794700 GGGAAGTTTACCTGGTGCCGCGGGCGGCCCACGATGGACGGGAAGACAGCGCGGGGCGCGTCATCGCCCGCAAAGCCGGC
CTTCACCAGCCCAGAGCCGTTGTCGCACACCAGGGCGGTGGTCTCCTCGTCGTCACACAT
mm4__chr22 38.74 Mbp_chr22_38739783 ACCTTCTTTCTGCAGCGTCAGGCTCAGGGAGGCCGCGGCTTCCCTGGCCGACTTGCCCTGCATCTCTGCCACATGGGTGA
GGATCTTGCTCTCCAGCTCTCGCAGCTGAGCTTGCATCTCCTC
mm4__chr2 17.88 Mbp_chr2_17879299 CGTTCCTTCCCTTCCTCGAGAGGAGGCGCTTTCCTGGCGCTTGTAAATGCTTCCCGGGCCGTCTGCTCCGCCTTCTTTGT
CATTCCTCCCCTCCCCTTT
mm4__chr17 67.43 Mbp_chr17_67433409 GTAAGGCTGTGGAACCGGAGTCTGGAGAGTCTGCTGGCTGCGCACAAACACGGCTGTGCTTCTGGGCAGATGAATGGAGG
GCAAGCCAGCCCCGG
GCAGAAGATAGAACAGAGAGGAAGCTGGGGA
mm2__chr1 229.43 Mbp_chr1_229433007 GCAGCCTGACCTGGTGTCGGGGGCGGCCCACGATGGACGGGAACACGGCCCTAGGGGCGTCATCCCCGGCGAAGCCGGCT
TTCACCAGGCCGGAGCCATTGTCGCACACGAGGGCGGTGGTCTCGTCTTCGTC
mm4__chr1 34.43 Mbp_chr1_34425474 GAGCAGGTATGAGTGCAGGGGGCAGGAGACCAGAATCTGTGATGGAGAGGATGAAAGCCCAGGGGAAGGGGTTCAGGCGG
CCCAATGTCCAGTGGCTCTCCGACATCTC
mm2__chr22 41.08 Mbp_chr22_41075137 GGAGTCCTTCTGACCCATGCCCACCATCATGACCTGGTGCCTGGTGCACCCCACGATGGAAGGGAAGATGGCCCAGGGGA
CATCGTCACCCGCGAAGCCGGCCTTGCACATGCCAGAGCTGTTGTCAACA
mm1__chr19 9.52 Mbp_chr19_9518228 AGTTAACAATGGCTCCGGCATGTGCAAGGTCAACTTCGTGGGCGACAATGCCCCCCGGGCCATCTTCCCCTCCATCGTGG
GGCATCTGAAGCACCAGGGCGTTATGGTGGGCATCGGTCAGAAGGACTCC
mm3__chr19 49.37 Mbp_chr19_49374724 TTCTTCCTCCCCAGGTACCCAGGATGGAGGAGAAGGAGGCCCTGGTACCCATCCAGAAGGCCACGGACAGCTTCCACACA
GAACTCCATCCCC
mm4__chr14 64.75 Mbp_chr14_64749116 GAGCCCCTGTCCCTGGAGCGGAGCCAGCGCGGGCGAGGGCATGGAGGGGGCGTCGGCCCAGGACACGCGGGCGAAGGCAG
CTTTTGCAGTGCAGCGTGGGGCCCGGGGGCCCGGCCCGCGACTCGACTCATCTC
mm4__chr7 41.90 Mbp_chr7_41899393 GTTGCCCTAGGTCACAAGCTGTGAGCACTCTCATTGGTAGCTTGGGATCACTGTCTTCATCCCAGGACCGTCTGGCACTC
CATC
CGCTCAGCATTCTACAGGAACCCATCAGGGCTGTGACTGG
mm4__chr2 186.59 Mbp_chr2_186589973 GCTGAGCTCTCCCCTGTAGAAGGGCGCCTCTCCTCCCCCACTTCCTCCTCCAGCTCCACAGCAGCCTCCCGGGCCGGCTC
CTCCTCCTTC
CAGGTCTCCTCCCAGTGCC
mm4__chr13 111.92 Mbp_chr13_111915156 GGTGACTCAAGAGACCGTGGTTTAGCCCCCACCTGCCAGTCCCCTCCCAGCCGTCCAGCCCTGCTGCCTCTTCCCGGGCC
TTCTTCCCCTGCCAC
CTCCACCTGCCTGCAGATCTCAG
mm4__chr17 77.85 Mbp_chr17_77846538 CCAGTGACCTACCATGAGCCACCTGGGCCGACTGGCCCTCCTTCCCCACAGAGCCCCTGGCACCCAGGACTTCCTGGCAG
GTGCTGGCCCTGAAGTCCTGGGCTTCCTCT
mm4__chr7 1.41 Mbp_chr7_1412191 GGGAATCACTTAAGCCCAGGTGGGACCCAGAGGCCAAGGCCGACTGTCCCTCCATCTAAGGTAACCTGGCTGTCCAGGGT
GGCTTCGGAAGCCCCTGGACCTGGGGTCTTAGCCCCACCCATG
mm4__chr17 18.12 Mbp_chr17_18118841 GGCGAAGGAGGAAGATGAGGAGAAGAAAGCCAAGAAAGGGAAGAAGGGGAAGAAGGCACCGGAGCCGGAGAAGCCCAAAC
GGAGCCTGAAGG
mm4__chr2 128.51 Mbp_chr2_128512502 AAGCATGGCTCCCAATCCTGTGCCTCTGCCTGAGATGGTGGTGAGGCCGGCCCTGGGCCTCGGTTTAATCATTTGCTAAT
CACAGTGAATAATTCAGGTTCTCTTAACCTCCCAGGACT
mm4__chr2 241.48 Mbp_chr2_241484300 CAAAGGAGTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAGGCATGCTGGTGAGTGGTCTTGCAC
CCTGCCTGGGATTTCCACGTGGTGCTGGGCTGGGCCCCACCTACCTCTCTCCTGCA
mm4__chr2 120.68 Mbp_chr2_120680361 CTCAAGCCTCCAACACACCTGGGCTCTTGGACAAGGGCTAGGTCAGACGCACAGAACCCACTGTCCCGGGCCTCCCTCCC
CTCCTTC
CAGACCGGCCCTCGATTTTCTTCTCGGAAGAACTGCTGTGGAGT
mm4__chr22 20.27 Mbp_chr22_20268454 CATTCCTGAAGAGGCGGCGGCCCCTGCAGGCGGCGGAGGGGATGGCGGCCCGGGCCGGAGCCGGCCGGGGACGCGGGCCC
GAGGGTGTGGCGGCCTAGGCTGGCCCGGTCCCCAAGCGGGCAAGGGCTTTGTCCCGAGG
mm4__chr4 3.64 Mbp_chr4_3640561 CCGGGAGATTCAGCTCTGGAAGGAGGGTGGACGGGAAGAAGGCACAGGAGAGAGACAAGATGGAAAGAGGGTGGACCAGG
GACGAGCCGGGAGTCTCAAAGCCATGGGGTCA
mm3__chr15 43.99 Mbp_chr15_43990080 GAGTCCTTCTGACCCATGCCCACCGTCACGCCCTGGTGTCTGGGGCGCCCCACAATGAAGGGGAAGATGGCCCGGGGTGG
GCATCGTCACCTGCAAAGCTGGCCTTGCACATGCCAGAGCCATTGTCGACGACA
mm2__chr9 6.83 Mbp_chr9_6834533 TGATATTGCTACGCCCGTCGTCGACAACGGCTCCGGCATGTGGAAGGCTGGCTTCGCAGGTGACGATGACCCCCGGCCGT
CTTCCCCTTCATC
GTGTGGCACCCCAAGCACCAGGGCATGATGGTGGGCATGGGT
mm4__chr1 203.49 Mbp_chr1_203492381 CATACAGCCCGCCAAATGTGCCATCTGCCTACTGGATGCCCTCCAGGATCCAGGGCTATCTTTCCCTCCACCCAGCAGAG
CCTCTGATGGTGTCTTTTCCCAGGTGG
mm4__chr10 24.95 Mbp_chr10_24952591 TTTGCATTTACCACGACGCCTCGCCCGTAGTCTGGCGCCTCCTCGCTGCTCCCGGCCATGTTTCTCCCGGGGAACGCGGG
AAGGGAAGACGGCGCGGG
AAGGAGCAGGGAGGGCGAAG
mm4__chr3 52.03 Mbp_chr3_52028639 CCCTAGAACCTCCTGTCCCTCTGCTGGGGGCCTGGGCCGTCGCCCACGCCATCTGCGGCCAGCATTCAAGCAGCTGCGAT
AGCAGGTCTGGGCAGAAGGACCCATGGAGAC
mm3__chr1 223.86 Mbp_chr1_223864749 TGACCCATGCTCACCATCACGCCCTGGTGCCTGGGGCGCCCCACCATGGAAGGGAAGATGGCCCAGGGGTCATCATCCCC
TGTGAAGCCAGCCTTGCACATGCCGGAGCTGTTGTCAATGACGAGCG
mm4__chr8 143.32 Mbp_chr8_143317782 GCTCCTGCAGAGTGATGGAGGCGTTGTAGGTCCGGAACACCTTGGCCGTCAGCCCGTCCATCAGCTCCTGGAGGTGCTTG
TTCAGGCTGGTCGTCT
mm4__chr22 40.68 Mbp_chr22_40684126 CCTGGGGAGCTCTTTATCACAATCATTAGTATTTCCTGGCCTGTGTTCCCCTCCACCCAGCACCTGGGGAGTAAAGAAGC
TGATGGTTATTTTCCTTACTCACTAACAGTAGGGTCTCCAGCTGCCACCCGTAACTTGAA
mm4__chr7 101.09 Mbp_chr7_101088443 CACCTTCTTCGGCTGTCCTTTGAGGAGCAGCAGCCCCAGAAGGATGGTGGGAAAGACGGAGCTGGTACCCAGGGAGGTGA
GGAGAGCCAGAGCCGGAGGGAGGATGAGCCGAAGACTG
mm4__chr21 19.53 Mbp_chr21_19526569 AGCTGCTGTTTGTTACTTGGTATCCTGGGTCATCTTCCCTTCCATGATAAAAATCTGAAAGAACTATAGGCCAGT
mm4__chr1 25.08 Mbp_chr1_25084161 ACCACAGCATTAAGGCGACATCAGCCCGCAGGCCAGGCGGGGGTGGAGCTACCAGAGTCTTTGGCCTGGGGCGCCTGCCT
CTCCATC
CTCAAGGCCCAGGGCCCCAGGGATTCTTGGTGCCACTCA
mm4__chr19 1.99 Mbp_chr19_1991619 ATGACCCGGACAAGAAACCCCTCCCTGTGGGAGTCCGGGATGCCCTGCATCTGACCTGCCAGGATGGAGGGGGAGAAGGT
TCTGG
GTCCTTTCCAGGATGCCGGACCCCCAAAGCCCATTGGAGGAC
mm4__chr7 6.90 Mbp_chr7_6898349 CCGTCCTGCTCCACTTCAGATATGTTGGTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAACCAGGGCCATCTTCCTCCTCATCAACACCTTTCCTCTCCCACT
mm4__chr4 9.74 Mbp_chr4_9736899 AGTGGGAGAGGAAAGGTGTTGATGAGGAGGAAGATGGCCCTGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCACCAACATATCTGAAGTGGAGCAGGACGG
mm4__chr4 3.92 Mbp_chr4_3920778 TTCATGGCGCTCCTACTGTGTGCAGCACCCTGTTCTCAGCAGTTTAAACCAGGGCCATCTTCCTCCTCATCAACACCTTT
CCTCTCCCACTCAGC
mm4__chr3 75.39 Mbp_chr3_75389543 CCTTCCTGCTCCACTTCAGATATGTTGGTGAAAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAACCAGGGCCATCTTCCTCCTCATCAACACCTTTCCTCTCCCACT
mm4__chr3 130.05 Mbp_chr3_130053670 CCATCCTGCTCCACTTCAGATATGTTGGCAAAAACACTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAACCAGGGCCATCTTCCTCCTCATCAACACCTTTCCTCTCCCACT
mm4__chr21 32.50 Mbp_chr21_32498742 AGTGGGAGAGGAAAGGTGTTGATGAGGAGGAAGATGGCCCTGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCACCAACATATCTGAAGTGGAGCAGGACGG
mm2__chr5 138.25 Mbp_chr5_138252934 CTGCTGCTGTCCTTTCCTCACCCCTTGTGGGCTGCAAGTCCACCTGGGTGTGGTGGAGGGGAAGAGGGCCCTGGGGAAGT
CCAGCTACCATAGGCTCAGGAGCAGAATCAAGGGAAGCGTGCA
mm4__chr10 46.09 Mbp_chr10_46092296 CACCCAGTCTCGTGCTGTCCCCATGGAGGGAGGACACCCAGGGCTCTCTTCCTCTCCAGCAGCCGCATTTGCATAAATGC
CGGCCATGCGGAGTCCCAGTGCGCACAGGTGGAGATCAGGAC
mm4__chr9 137.62 Mbp_chr9_137615978 GGAGGGTGCTTCCAGAAACAACGGAGATGGTGGTGAAGAAGGCTCTGGGTTCAAATTCCAGTTCTCCTTTAGGGCGAAGG
GGTGACTGTGGCTAG
mm4__chr12 52.18 Mbp_chr12_52180837 TGAGGGCTTTGATTGGGCATAAAGGAGAGTAGGATATCTGGAGGGAAAGAGGGCCCAGGGCCCATGAGGAAGGAGCCCCT
GGGGCAGGCTGGGCAGGCTACCTTCTTC
mm4__chr19 12.89 Mbp_chr19_12887107 AAGTCATCCTGTGTGTCCGGGAAGGGGCCCAGGGCGGTCAGTGTGCTGATGGAGGGCAAGGCGGTCTCGGCTGTGGCCAT
GGCTGGCTGGTGCCCACCCTGGGCCTCAAGCCTCCTCTTCCTCG
mm3__chr2 237.88 Mbp_chr2_237882745 CAAGGGTCTCCAGTAGCAGCGAGGGCCTGGGGTTCTAGGGTGGGCAAGTTTGTCCAAGTAACTAGTGGAGGGGAAGAGGG
CCCTGG
AGAGAACACGAAGGCACAAATAGGGTGAGAGGCGC
mm2__chr15 41.85 Mbp_chr15_41854120 ACAGATGACAGGCTGTGGCCTCCGTCCTCCCCCTTCATCAGGGCCGTCTTCTCCTGCATCCTTCCCTGGAGCTCAGCTGC
TGCCTGCTGAAAGCTGTGGACCTCATGGGCTGCAGCCAAGTTCTGGGAGAGG
mm4__chr11 64.59 Mbp_chr11_64593635 TGATGAACACGGGCACTCTCCGTAGGTCTCTGACCTGGCGCCATGCAGGGGGGCTCCATGCAGGCTCCAGGGCTGAACCA
CTCGGTCTCCTTGCAGTGATGGAGTGGACGGCGGCACGGGCCCGACCCTTGGTGATGAC
mm4__chr2 74.39 Mbp_chr2_74389884 TGTCTAATATTGCTATGTGAAGCCTATCCAGCTCCGTCTCCCCCTCCTTCCCTAGTTCCAACCACCTTATACATCACAGT
AAAGCACATACATCTGCTAAAATACTGCTTTGTCCCTACACCCATCTGCCCGACATCTTT
mm4__chr3 184.77 Mbp_chr3_184773901 CCCTTTGGCGAGTCACTGTCCCGGGCTCTCTTCCCCTTCATGGCAGCAGCCAGGCCCTCCCTGCACAGGCCTTGAAGGGA
GAG
mm4__chr17 2.85 Mbp_chr17_2852412 AGTGGTAACGGCTGCTTCATAAATAGACCAGGTGCATTTAAGAACCACCCTGGGGCTTCCTCCCCTCCACCCCAACTCCA
GTGCCAGCAGGAAGCTGTGGGCATTGGAGA
mm4__chr20 21.51 Mbp_chr20_21513366 CTTTCACTCCCAGCGTCCAACCCGGGCTGCGGCTGCAGGAATGGAGGGGACCACGGCCTCGGCAGCCAAGTTTTGCTACT
TACGGGAGTACTGAAGGCCC
mm4__chr16 19.67 Mbp_chr16_19668371 TCACGGTCAATACCTTGGCAGTTTTAGAAAGAACTTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTGCACACACATTCTCTCTCCA
mm4__chr17 32.49 Mbp_chr17_32486287 ACTCGGGAGGCCTCAGTAAAGGCGTCGCCTCTCCCCGCCCAGGGCCTTCTTCCCCGCGCTCCCTGGCTGCTTTCCACAGG
GACGGGGATGTCAGGTGGAAGGAGGGA
mm4__chr17 28.03 Mbp_chr17_28032575 GGAATTCTCCTGGGGCTCAGAGCCTGTGTTGTTAGGATGGGAAGAGGCCCAGTTGTAGGGGAAGAAGGACCAGGTGGTAC
GTGAACTTAGATTTGTCTGGCCTCACCCA
mm3__chr5 98.34 Mbp_chr5_98338821 GCTCCTCATCAACAAGGGCTCTGGCATGTGCAAGGCCGGCTTCACAGGTGACAATGCCCCCGGGCCATCTTCCCCTCTGT
C
ATGGGTGCCAGGGAGTGATGGTGGGCATGGGTCAAAA
mm4__chr16 50.61 Mbp_chr16_50614051 TAAAATGCAGCTGGGAGGCAGGATGGTGGAGAAGAAGTCCCTGGTGGCATTTCTGGTCTCAGGAAGGGGCAGACACCCAC
AGGTGAAAAAGCTGGAAATCACCCTAGAGGGACTGCCCTGGGTGAGTGAATT
mm4__chr18 48.23 Mbp_chr18_48229012 CAGAGCCTCGAACCATCTGGAAACATAAGCACGGCAGGATTGTGCGAGGCTGGAGGTGAAGACAGCCGGGGTCATGGGAA
GGGAGGCGGAAAAACAAGACAGTGCCAGATCCCAGTC
mm4__chr11 17.58 Mbp_chr11_17578272 GAAACCAAGCAATGCCCAGGAGCGACCAGGGAGGGAGGAGACTTCCGAGCCCGTCTCTCCCTCCATCCTCCAGCTGCTGC
CCCTGTAGCCCAGGAGCCCATACTGAGGCCCCAGGGCCTCCGCTCCCATCTTCTTC
mm4__chr17 79.60 Mbp_chr17_79596224 GGGAAACAATTGCACACGCTCCAAGGTTCACTTCCAAGGAAGGAGGGGAAGAAGCTCCTGGGGCTGATGCAGAGCCCAAC
TGA
mm4__chr12 57.21 Mbp_chr12_57213518 TTTCCTGCTTCGGCCACCAGAGGGAGACCTGCCCCGTGCTGGAGGCAGGCTGGCGCGTGGTTTTTAGTGCCCTTCTCCCA
GGGCCCTCCCCCTCTCCATC
TTACTGTGCCCGGGAAGCGGGTGGCACTGGACTTGACAT
mm4__chr19 16.02 Mbp_chr19_16019305 CAGCTGAGCCACCCTACAGGGAGGGGCGTGGGGGGCAGTGAGGGCCATACCCCTGGGAGGGCGGAGGGGAAGACGGGCAG
GG
TGTCAGCCAGGGCATGTCAGGGTGAGGGCAGGGATGCAGCAGAACTTG
mm3__chr18 76.67 Mbp_chr18_76674718 CAGGTCTGAATCCCTGCTGGCTGCATCTGCAGGCTGGAGGGGAAGTGGGCCCTGGGTGCAGGACCCCTGCAGGAGGCCAT
CACAGGGTCCCTCCTGGGGCTCCAGGCAGGAGGAGCCACAGGCTCTCAAGGTCG
mm2__chr18 62.44 Mbp_chr18_62442087 CCTCGTCATCGACAATGGCTCTGGCATGTGCAGGGCTGGCTTCGCAGGCGACAGTGCTCTCCAGGCCGTCTTCCTCTCCA
TC
ATGGGGCACCCCAGGCACCAGGGTGTGATGGTGGGCATGGGTCAGAAGGACTC
mm4__chr16 1.79 Mbp_chr16_1788947 CTCTGCAGCTGTGAGACGGGGGCGGCCTGGGCTCTCTTCCCATCCATGTTGCCTACCTGTGCCCCTGGCAGCCGCGTGTC
CACACAGTTAGCGGAGCGCGGGACTTCTGCAGTCCTCAGGTGAC
mm3__chr1 55.01 Mbp_chr1_55007156 GAGCTACAGTGAGGACCACCGCTCCTTGCTGGCCCCTGAGATGGGGCAGCCGAAGCTGGGAACCAGTGATGGAGGAGAAG
GTGGCCCTGG
CGACGTTCAGGCCTGGATGGAGGCTGCCGTGGTCATCCACAAGGGCTCAG
mm4__chr3 38.00 Mbp_chr3_38000563 AGAGACAGAGAGCCAGACAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTG
G
GACTCAGGTGCCAAGCACAAAGTCAGGGACAGGA
mm4__chr6 29.68 Mbp_chr6_29675343 GCTCTCCATCCTTTCAGGGGTTATCCTGGGCCCTTTTCCCCTTCCTCCCTGCTTGGCAATTCTTACCTGAAAGGCCTTCT
GTGTTTGGGAGA
mm4__chr7 50.66 Mbp_chr7_50663081 TCTTTCAAAGGCCCACTCGCTGTCCCTGCTCCACGGGTGAGGATGACAGGGAAGAGGGCCCAGGGTGCATCCTCAGAGCT
GACA
mm4__chr1 15.43 Mbp_chr1_15426387 GCTCGAAGGTTCCTGGAAGTGTAGAGGGGGAGACACCACAGAAGGAAATCAGGGCTGTGATGCAGAGGAAGAGGGCCACG
G
CACTGGGTGACTTCACGCCCAGGATCTCACTCCGAGACAGGAGCTAGG
mm4__chrY 26.12 Mbp_chrY_26118940 CGAAAATGATGGGCCTGGGAGAGCCATTCTGGGAGGACGCAGACCTAGACAGGCCTTGGGGGGACATCTGCATGGAGGGT
GAGAGGGCCCTGG
TTGAGCCCAAACTGAGCCCCAAGTGTTAGTCAGC
mm4__chrY 23.55 Mbp_chrY_23551653 CCACCCTGAGGCTGACTAACACTTGGGGCTCAGTTTGGGCTCAACCAGGGCCCTCTCACCCTCCATGCAGATGTCCCCCC
AAGGCCTGTCTAGGTCTGCGTCCTCCCAGAATGGCTCTC
mm4__chrY 22.64 Mbp_chrY_22644510 CGAAAATGATGGGCCTGGGAGAGCCATTCTGGGAGGACGCAGACCTAGACAGGCCTTGGGGGGACATCTGCATGGAGGGT
GAGAGGGCCCTGG
TTGAGCCCAAACTGAGCCCCAAGTGTTAGTCAGC
mm4__chrY 21.94 Mbp_chrY_21941861 CCACCCTGAGGCTGACTAACACTTGGGGCTCAGTTTGGGCTCAACCAGGGCCCTCTCACCCTCCATGCAGATGTCCCCCC
AAGGCCTGTCTAGGTCTGCGTCCTCCCAGAATGGCTCTC
mm4__chr17 44.97 Mbp_chr17_44968833 CAGGTCTGCAGGGGACAAAGAGCGATTGAGGGGAGGACGGAGCGGGGAGCTGGAAGGTAGGATGAGAAAGGGGGTTATGA
AGCGAAGAAGAGGATACGGAGGGGACC
mm3__chr7 157.85 Mbp_chr7_157849865 GGGGAGGCCAAACGTGTTATTTTAGCTAAACTTAGGGTTCGATCACCATGGAGGAGGGGAAGACGGCACAGACCCTTCAC
CGCTGGCCCTGATGGCAGCTGGGGCCCGTGTGTGCCGTGTCCTGGGGACGACATGAGAT
mm4__chr17 66.80 Mbp_chr17_66797790 GACTGGTTGGGTCTGACCACCCCAGTGCCCTCTTCCCCTTTATCTCTGTCCCATACCCATCGTGTGGTACGTCACATCCC
AGAGGGCAAAAGCCTCAGTCGGCAAAAGGCGCGGGTGACCTTTGGAGGTGGAGACAGTGC
mm4__chr2 25.33 Mbp_chr2_25332976 CAAAGGCCACTCTCCGCTTAGCTCCAAAGAGACCAGTGGGCAGGGAGGGAAAGAGGGCCCAGGCCTTGAGCAGGCTACTG
GGTC
mm4__chr14 23.14 Mbp_chr14_23139516 AAGCGACATTGGCAAAGACATACACAAATGTGACCAGTGGGATGGAGATGAAGATGGCTCTGGGAAGGTTCCTGTAGAGG
GAGAGGAGGTGAGGGGAAG
mm4__chr3 122.07 Mbp_chr3_122067071 CAAAGGTTCTAGGGGTGGGGGATGGTGGGGAAGATGGTCACGGAATAGTGAATGGTTCAAGTGAAACTGTTGTATGGGTT
GTGAGGGCAGTTT
mm3__chr19 33.41 Mbp_chr19_33406852 GGTCTCGCCATTATCTAGCCAGGGAAGGAGGGGAAGAGGGCACTGGTGGCTGCTGAGTGTGAGGGCTGGGACAGGTCTCT
CCTCCTAGCCAGGCTGGCCACCCACCCCCCATGCCCAGGAGCAACACAAAAG
mm4__chr11 62.77 Mbp_chr11_62766152 TTCTGTGCTCTTCTGCCAGGAAGAAGGGATGGATGGGCAGAAGGCCTGGGGCTGCAGGGTGGAGGTTGGTTCTGTGCTC
mm4__chr2 716.99 Kbp_chr2_716994 TGGGATAGAGGGTGGAAGGGGCAGACCATCCCAAGAAGACACCAGGACACTGAAGTGGCTGCTGGGGTGGGTGTGTTGGG
TGGTGGAGGGGCAGCAGGCCCTGGTCATGGAGATGAGGCTGGGGAT
mm4__chr7 1.30 Mbp_chr7_1302239 TGAAGCCTGGGAGAAACCACGTGGAGGCCCAGAGACGTGGGATCGAGAGGAGAGAGCCGCACCCTGGAAGGGCCCCGGCC
CGTCTGCCCATCCCTC
TGTCCAGGCCGTTATCCTCTGTC
mm4__chr5 140.14 Mbp_chr5_140143532 CCTGGGCAAAGGAGTATGGGCCTATAGGGTCCCCTGCTAGGCCAGGACCCTCTTCTCCTCCTTCCCTCACCCCTGTTCCT
GTGCACACCAGAACCCCACCTCAGACTTATCCCAGAAGAGTTTTGGCCCT
mm3__chr16 17.65 Mbp_chr16_17652335 GGCAAGCTATCCCCACCAATAATCATTCACTTTCAGGGTAGCCTCTGAACAGGTATTGACTTTAGAGACTAGCAATTCAT
CCCGGGCCCTCTATCCCTCCATCGAGATTCTTCGGCAGTCTTTGAAGCAGA
mm4__chr10 131.72 Mbp_chr10_131722333 CACAGATGCAGAGAGGAGGCCAGAGGCCAGGCCTCAGCCAGGGGCTCAGGAGAGGCAGGTGGGACCCTGACCTCCACCCC
CTGCACCTGCTGACTCCCAGGGCCCTCTTCCCCACCCCCTACCTCCCCACTCCTGCTC
mm4__chr4 84.31 Mbp_chr4_84312791 ACAGGTCTCTCCATCTCGCTTATTGACAATGATGGAGGGGTGGCCGGCCTCGGATGCCTGGCGAGGCTTGCTGCCTGACC
TCACAGGCCAGCTCTAACTTTTCACAGAGCCCAGGGACAAGGCAACTAG
mm4__chr20 36.34 Mbp_chr20_36336015 TCCTGTTTCTAAGCGCTGCTCCCACCCTGTGGCCAGGGCCCTCCTCCCCTGCCTCCAGAGGGACAGTTCCCTTTAGAGAG
TTTGCCAATCCAGTCCATGC
mm4__chr11 40.29 Mbp_chr11_40293456 CAGATCCTCCAGGTGTTGCAGAACTCCGCGGTCGGGGCCGGGATCACGGGGGAGACGCAGGATGCGGTCCCTCGCCGGTG
GCCCCTGCCAGCCCCCGGGTCCCCTTCTCCTCCATCAGCCGGTAGTGGCTCCGGGAG
mm4__chr2 239.99 Mbp_chr2_239993896 TTCAAGCCTGAACAGACGGCAGGAGGGAAGGCAAGATGGCCCAGGGCACAGGACCACACAGAGGATGCAGAGAGCAGCAG
CTCTAGCTCCTGCAGCCCGAGAGGTGAGATGCCCCACACAGTCACACAACCT
mm4__chr1 214.04 Mbp_chr1_214043657 AGGCTGTATGGTCTGTCAAGCCATTTCTGTCTCCCAGGCCTCCTTCCCCTCCGTCCCCAGGACTGGCTTCCTGCCCATGA
TCATAGAGTCCTTCTACATCTCCCCAAAAATCATTCATAAGAACTCACAGGAGGAGGCAC
mm3__chr1 202.87 Mbp_chr1_202873370 TGACAATGGCTCCAGCACATGCAAAGCTGGCTTTGCTGGGTATAGTTCCCCGAGCCATGTTCCCCTCCATCACTGGGTAT
CCCTGGCACCAGGGCATGATGGTGGGCATAGGCCAGAAGGACTCC
mm4__chr12 3.17 Mbp_chr12_3170602 TGAGTCAGTTCTGTGTGGGGGGGTCGTGATGGGGGAGCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAGATCAGGCCTACCCAGCTGAAAA
mm4__chr3 50.29 Mbp_chr3_50294867 ATGTCGGACAAAGGCCTGGTGGTGGGCAGGTGGCAGCCTGGGTGGGAGGTAGATGCTGGGGAAGAGGGCACTGGAGGCGG
CCCAGAGCCAATGCAGTTGAGTGTTGCGG
mm4__chr11 257.68 Kbp_chr11_257677 GGCCTCTCCTGTCATCATCCTGAGGCCTGGACCCTCTTCCCCGCCACCCCCAGGTCTGCCCTTTAATAGAAAGAAAATGA
TGTGACCCAGAGAGAAAGAGAAGGTGGCCAAGTGG
mm4__chr4 6.52 Mbp_chr4_6521615 GAGTCGTCTCAGGAGCCCTAACCCACGTCCCACCCCTCCAGGGCCCTCCTCTCCTCCCTCGAGGTGATGTGAGTTCATAC
GTAGGAGGCACTTACACAGGAGCTGGT
mm4__chr22 17.11 Mbp_chr22_17114252 TTCTGTACCCGACGCTTTCCCCACGGGGCCTCCCCTCACTCTGAAATGGCATCCAGGTCCATCTTGCCCTCCACCTCTGC
ATGGCTCTCCATGCCCCATCGCCTCTCCCAGATCCTAG
mm4__chr19 49.75 Mbp_chr19_49750638 AAAGAGACCCAGAGAGCCCTCTGCCAGCTGTTTATGACCAGTTCCAGCCGATGGAAGGGAAGTGGGCACTGGTCGATGTG
TGGAAAAGACAGGCATGATCTCTTCCCCTGTTCCCCCTGCTTAATGGCTGGAAGGCA
mm4__chr16 642.27 Kbp_chr16_642275 CCTGTCGAGGTGAGACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCCTCCCCCGCCGGCCGCCCTAGAGCGGAGG
GTGACCTTGGGGAAATGT
mm4__chr11 69.10 Mbp_chr11_69097791 CTCCCATGGGTCCTTAAGCCAGTCTTCAAACAGTTCATGCCAGGGCCCTCTGCCCCTCCTGCGTGGTCCCCACCTGGATC
CCAGCAGCCTCAGGTGTTCTTGGGCTCAC
mm4__chr11 133.76 Mbp_chr11_133757352 ACAAGAGGCATTCGGACAGTAGTAAGGAGAATTCAGCTAGAGGAATTGGCAAGTTGATGGAGGATAAGAGGGCACTGGTG
ATAGATCATTAAGCCTGTAGATGGTGCAAGAACTGGGG
mm3__chr3 10.39 Mbp_chr3_10386982 AAACCACAGATCTGGCCCTGCTAGCATTTTAAAAACCACAGATCTGGCCCATAGAAGAGTCTGGGGGCGTCTTCCCCTCA
CTC
AAGCCTCAGTGAGGTGAAGACAATGAGTACAGGCTGCTGCATC
mm4__chr11 113.40 Mbp_chr11_113397905 GCTGGGGATAGTCATGGCAAAGGATAAAGGTTTCCCAGGATAGGGTGGGATGTGAGTCCTGACAGTGACCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCACAGGCTAGAACTGCGCCACTGATCTC
mm4__chr17 57.91 Mbp_chr17_57905476 TCAGTTTAGCTGCACTGGGGGTGGCAAGCAACTTGGGAAAGACTGAGGCTGGCGGGGAAGATGGCTCTGGGCTGGAGGGC
CTCCCCAGTGCGTGCTCAGCTCACATTCCCCAAACAGGCT
mm4__chr11 77.21 Mbp_chr11_77207491 AACTTACGGACAGCAGACGGAAGAGAGAGGAACTGGGGGAGAGAGGGGAAGAGGGCACTGGCATCTGGCCATCTTCTTCC
ATCCCTGCAGCCTCCCCTTACATGGAGTGGCTG
mm4__chr17 44.91 Mbp_chr17_44910382 ACAGGGCAGATGTCAAGCTCTCACCCAGTTCTGCTGTCGAATGGGGTGCAGGGAGGGGAAGAGGGACCAGGGCCTAGCAG
GACAGGGGCAGCTGCAAGCCCCACCTAGAAGTACCC
mm4__chr12 107.40 Mbp_chr12_107403010 CTGTGCTATTGGGAGGTGGGACAGGAGTACAGTAGTCACCAGCCACAACATGTCTTAGACATGGATCCTGCTCCTTCTTC
TCCTCCATC
TGCTCCAGGTTGTGGAGAGGGCTCCCACAGGCCTCGGACCCAAGTCATTCA
mm4__chr17 32.27 Mbp_chr17_32268944 ATGAGGGAAGCTAGGCAGGAGCTGCAGCACTGAACAGAGGCAAGAAGGTGACAGTGAGGATGGACGGGAAGAGGGACATG
G
TGATGGAAGAATTGGAAGATCTTAATAGACCGTAGGTGAGGGGAAC
mm4__chr17 1.02 Mbp_chr17_1022823 CAGATAGGCTCGGGCTGATGCCGTGTCCCAGGGCCTCGGCTGGCTTCCCCTCCAACACCAGAGAACTTCGAAGTTCCCCA
AGCCTCAT
mm4__chr12 52.00 Mbp_chr12_52003255 GCCCCTCATTCCTGACAGACCAGAGAGCCAGGGCCCCAGGCCCTCTTCCCCCCCACCTCCCCAGCTTAGGAGCAGTGACA
GTACCCA
mm4__chr15 89.63 Mbp_chr15_89632845 GGCTGGACCTCACTTCACTGGACCTCACCTGGCAGGATCTCTCCTGGCAGGGCCTCACCTGGCTGGATCTCAGGCGCTTG
CTCTCCAGCCCCGTCTTCTCCTGCATCAGGGCCTCCTTCTTGGCCAGGATGG
mm4__chr16 88.99 Mbp_chr16_88993394 CCTCACAGCCTCAGCACTTGCTTCCCCCTGCCGGGAGCACCATCCCCAGGGGCCCCAGGACTCCTTCCCCTCCATCCCAA
CACGTGGTTGGGACTAAACAATATGTTTGCAACTTGTTTTGGGGTTCACATGAGGGTTCC
mm4__chr12 124.85 Mbp_chr12_124849565 CGTTAGTGACTTCCTCCGGCACCCACCCAGGCCCCTTCCACCCTTGCTGCCCGGGCCCTCCTGGCCTCCATCCAGCTAGC
CTGGGACAGTCGGCCCCACCCAGCACTGGCTGCTAACTATCTCCGTGGCC
mm4__chr15 69.40 Mbp_chr15_69400303 GAGGCCAAGGCGAGTAACATTGCAAGTTGACAGAGGTCAGGATGTCTGCAGCAGGTGCATTGTTAGGTAGCATGGGCAGG
ATGGAGGGCAGGTGGGCCCAGG
AGCCTAAAGCATTCTGATGGGGTATGGAGCCAGTG
mm4__chr4 16.56 Mbp_chr4_16564032 CTTGCAGGGTTACAGCTGGGTCCCAGGCTCTCTTCCCCTCCCTCATTCTCCTTTCTTTTTGAGCTTCCCCCTTCTTAATG
GTCTTCAAGATTTTAATTACCAGATACTCAAAAGACTCACAGC
mm4__chr11 125.35 Mbp_chr11_125346873 GTCAGGGGCCAGAAGACAGGCAGACCCAGGGCCACCGTCCCCTCTATCCCTCTCTCTGAACTCCAGCACTCTTCAGATGA
ACGGGGCTCTG
mm4__chr22 24.88 Mbp_chr22_24884678 AGGCTTTTAATATCGGAATGTGAATAGATGAGGGGGAAGAGGCCCCAGGGCCCTTCAGGGCAGCCTTCCAACACCATCAC
TTCCCACAGCGCATGTACAGTTAGGACCTGCTGGCCCCACAGCTTGACTAAT
mm3__chr15 65.33 Mbp_chr15_65329054 GTGGCCTCTGTGGTCTTCGCCTCCGTCGTCTTCCCCTCCATCAGGCCGCACCCCTGAAGTGGCAGCACGGAGAGCTGGGT
CTCCTCACACGGAGCGGGGGCTGCAGGATCCTGCTGGGGAAAG
mm4__chr12 48.18 Mbp_chr12_48184032 CTCCGCTTCCCTCGGCTCCCGCTAGCCCCTCCCGGGACCTCTCCCCCTCCACCCCCTCCCCCACCCCGGAGGCCGGGCTG
GACGCGACCCAGAGCCTCCGCCACCCGCTTCTGCCACTCAATGGAGGACGGTCTGC
mm4__chr1 39.68 Mbp_chr1_39682384 TCTTTTGCAGGGTGAGGTGGTCCCTCAAAGATCTTGATGGAGGGGAGGAAGGGCTTGGGCAGAGGACTGGGTGGGCCAGA
GAGGGGGGCTGGAGTGTCCCTCCTCCTGGGAGGCCAGCCAGAGAGGTCATCAGGT
mm4__chr15 74.32 Mbp_chr15_74318598 TTGTAGCAACAGTCCCTGGGGACCCATCCTGGGGAACAGGACTGCTAGCAGTAAAGATGGGGGAGCCAGGGCCCCCATCC
CCTCCAGC
CCCCAAGGCTGCCCCAGGCCTCATTGACAGCTT
mm4__chr16 2.52 Mbp_chr16_2523267 TGAGCCGTCTGTGTTCTAGTTCTGTCCAGAGCCCCCGCCGTTTTCCCCTCCAGCACAGGATTCATTTCAGGATCATCACT
TGCGTTATATGCCCAAGGGGTCCCTCTCTTGGTGTGTG
mm4__chr14 78.07 Mbp_chr14_78074932 CAAACGTGGATTCAGCTGGCAGTGGGAAGGGATTCAGAGATGGAGAGGAAGAGGCCACAGGCAGGGATGGGGAGGAGAGG
mm4__chr19 42.21 Mbp_chr19_42207484 AGCATCTCACCAGCTCCAACTTGGTCTTCTGACCTCCAGCTTCCACAATGGCCTCCTCCCCTGAACCCTTCCACTCCCCC
CAGGGGCCTCCTCCCCTCCCTC
AGCAGCCTCAGCCCTTTGCAG
mm4__chr20 62.51 Mbp_chr20_62506962 CCACATGTCCCAGAGGTGACTGGCCAGGAGTGTCGGATGGCGGGGATGGCGGCCGTGGGGGCTCCGCTGGGGAAAGCGCA
GCCACCCAG
mm4__chr9 134.05 Mbp_chr9_134051381 TAGACCATGAGCTCCTCCCCAGCGTGGGCTCAAAGGCAGCCAGCTATGGCGTTAATGTCTTCCGTATCCCCGGGCCAGCT
GCCCCTCCAAC
ATCACCCACAGGCCACACTCATCCAAG
mm4__chr5 138.35 Mbp_chr5_138345006 AGTCCTAAGACCTGAGCCCCCAGATCCAGAGAAGCTTCCTGTGCCCCCTGCCCCTCCATCCAAGAGGCACTGCCGCTCAC
TCTCAG
mm4__chr2 237.91 Mbp_chr2_237913486 GAGAGACTCCAATACACAGGACAGATGAAGGCGAAGAGGGGCCAGGATGCTGCCTCCCCCTTCTCTCCTCTGTTCC
mm4__chr18 26.41 Mbp_chr18_26405334 CTTGACTGCAGCCTCGCTTGGGGGAAAACTCATGACTGGTGAGAGGTTTGGAGATGGAGGGGTTGTGGGCCCAGGCTGGA
TCAGAGGTCTTATCCAGCAGGGC
mm4__chr3 15.08 Mbp_chr3_15075613 CCCTGGCTTCACTCACTTGTCTCTCCACGGCCCTCTTCCTCTCCATTTCCTCCTTCCTTTTCTTTTTCAGTTCCTCAAAC
TGTTCTTTGGTTGGCAGTGACATCAAACCAAGCAACTTTTCCTGCAGGGA
mm4__chr7 2.63 Mbp_chr7_2634566 GCTGGGGAGTGGGCATCTGCCCCGTGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCCTTTGTCCTTTGCTATTTCTGGCCCC
mm4__chr11 62.63 Mbp_chr11_62626010 GTTCCTACAGGCAAGGGCATCCCTAAACCTGCCCCGGCTTCCCCTCCTTCCCCCATCCTAGGGGCCAGATTGGTCACTCA
CCTTTTGTCTGGAGTACCACAGCTGCTGGCTTTCCAGCCCCTATTATCACCACCCG
mm4__chr1 10.83 Mbp_chr1_10834500 GCCAGTGAATCCAGGGAGACTGAGGCTAGAGCAGGGAAGGAGGGGAACACGGGCGGGGGGGGGTGGCACTGCATGGTATA
mm4__chr11 64.83 Mbp_chr11_64832789 AAAGGCAAGCATGGGAGGGCTGCAGGGACCCTCAGCCCCCCATGCCCATCTTCCCCTCCCTCGGCCCCCACTCACCGACA
GAAAGCCCTCAT
mm4__chr1 201.56 Mbp_chr1_201560377 TGGCTGCTGCTTCTTATGGAATCTTCTTCCCTTTGGGTTATGGACCCCTTAGCCAGCGCCAGCTTCCCCTCCACCATCAG
CATATCCCTCCTGCCAG
mm4__chr1 219.93 Mbp_chr1_219928676 GCAGTATCTGAACAGCCCGTGCACCGCCTCCCGCGGCCCTTTTCCCCTCCCTCGCGGCCTGGGCCTGACTTGGCAGGTGG
CCACGAGCCGATGTCTCTCTTTGTGGGACAGGACTGTGCAGAGAG
mm4__chr10 80.26 Mbp_chr10_80263978 ACTGGAAACATAGGCTCTGGGAATGGAGGGGAAGAGGGCAGAGGAAAGGCTGGCAGCTGAGGTGGGGTATAAAGGGAGGG
GAGTGTCAGA
mm4__chr7 155.38 Mbp_chr7_155378790 TCAGAGGAGAAGGATGGGGTAGAGATGGAGCGGAAGCTGGCGCTGGAGCCACTGTGTCCTGCCGGCTGCACCTGCACTCA
ATCTCAGGTACCATGCTGGACAGTGGGGAAAACAAAAACCTGGAGAACAGCCCAG
mm4__chr1 223.75 Mbp_chr1_223748065 CCTCTGACCACAGGTTCCCTGGGAGCCCCTGCCACCTGCTGCCCCTGCCACCTTCCCCTCCATCTGCAGTGCTGTGCAGC
CTTCCCCTGCACTCTTGCAGAGCTAATAGGCCCGTGG
mm3__chr17 50.15 Mbp_chr17_50152206 TGCATCTCAGGCCTTTCTGCGGCCTCTGCCTCCTCCCCCGCCCTCTTCCCCTCCATCCTCTTCCTCCTTTTCCTAATCTC
CCACTCTCTCCCCCCTGGCCTGGAAGGGCTGGCAAAGGGAGCCCTCCTACCACTCCA
mm4__chr7 69.60 Mbp_chr7_69601000 GCACCTGCAGCGTTGATTTTCAAATGCACATTTTCCTTCCAGCCAACTGGCTCCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCTGTCCAGG
GTTGGGGGGAAACTGTCTTTGCCTGGACCTGTC
mm4__chr7 151.08 Mbp_chr7_151081802 GACACGTGGCAGTGGAGAACGCAGTTGGGAGGGAGGTGAAGGCTGCCCAGGGTCTGGGTGTCGTCGCCTAGCAGCTGCCC
TTGGTAG
mm4__chr6 159.18 Mbp_chr6_159177632 AATTTATGGGTGCTCTGGGGGATGGTGGGGAAAACTGCCATGGTGGCACAGAATCACATATACAATAAAATCCCCCTGCA
GAGAAGGCTCGGCCTCCTCTGATGGATGTG
mm4__chr6 145.85 Mbp_chr6_145847289 TCACACTTGCAGGTTTTATGACTAGTTAAACATCTTTTCATTTGTACTTGAAGATTAATTTTTTCTAAATCAATCTTCTG
TGAGAAGATGGAGGGAAAGACTGCTTAGGTTTTTCTTTATGCTCCAACTGTACACCTTGG
mm4__chr5 5.73 Mbp_chr5_5725804 ATCTGGGGCATGGAAATGGGCTGCAGCTCCAGGACCTTCTTGAATCCCACCATGTAGGGGAACACTGCCCTGGAGGTAGG
GATCTTGAAATTCTGCCTTTTCAAGAGCAGCA
mm4__chr5 141.75 Mbp_chr5_141747456 GAGAGCCTCCCAGCAAGAAAGCTTGGGCTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNACCTCCCGGG
CCTCATCCTGCTCTGGGGCTTGTGGACTGAGTCGGAG
mm4__chr3 53.72 Mbp_chr3_53718441 CCCTCTTTCCCCTCCTGTTGTCTCAGAGAAGCAGGTGGTGAGGAAGACCGCCCAGGCTGCAGCAGAGCCCCGGGCCATCG
CCTTGGGTGTGGCGGGTGGGAAGGCTCCTCGTAC
mm4__chr21 34.56 Mbp_chr21_34564449 AAGGAAGGAATGCAGCCAGGCTGCGATTTGGGGGAAGACTGCCCTGGGCCGCCCAGAGCCTGATGTGAAA
mm4__chr20 33.74 Mbp_chr20_33738858 GAGAGTTGGTGGAGAGTGGCTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCGCTGGCAGCGTCAGGAGGGACACA
GCCTGCATTGTGACAAGGGAAGGCATGGA
mm4__chr2 26.51 Mbp_chr2_26513730 CCTTCCCAGGAGAGGATGGAGGGCAGGGAGCAGATGCAGGGGAAGCCTGCCTGGGCTCCTAACGGGGTCAGAGGTGAGGC
ACTGAC
mm4__chr19 23.28 Mbp_chr19_23283034 TCAGGTACTTAGGAGGCCGAGATGGATGGGAAGACCACCTGGGCAAGACCAGGGAGATCAATGCCACA
mm4__chr19 18.43 Mbp_chr19_18434048 TATTTCACCGTCCCGATCCCATCCGCCCCCACCCCGGGACCCGCGCCCCAGGGCGGCCTTCCCATGCATCGCCCCTCCCC
CGTTCCCTCCTGTCCCCACCCCATGTCTGCCCAGGACCCA
mm4__chr17 56.29 Mbp_chr17_56290561 ACTGGCACATTTGAGTTGCAGCCAGGGCATTCTCCCCCACCATCCTTTCTACTTGGGGAAACATGCAAACTAAATATTTT
AAGAGCCCAGTGAAGAGTTGAGT
mm4__chr17 46.84 Mbp_chr17_46842052 CGCTCCTGCAGAAGGCTGGCCGCGGTGGCGCCCTCGGCGGGGCCTGGGCTGGCCTGGGGACCCGGGAGGCCTCCCCCTCC
ATC
CCTCCAGGTCCTCTCCCACCACTTGCCTTCTCACACC
mm4__chr16_KI270728v1_random 1.02 Mbp_chr16_KI270728v1_random_1015081 TTACTTGGGCACAGCAGCATCAACTCATTACAGGATGGAGGGGCAGAACACCCAGGGCACCCCTGGGCTCACATGGCGGT
ACAGCTGCAGGACAGAG
mm4__chr16 33.12 Mbp_chr16_33115624 CTCTGTCCTGCAGCTGTACCGCCATGTGAGCCCAGGGGTGCCCTGGGTGTTCTGCCCCTCCATCCTGTAATGAGTTGATG
CTGCTGTGCCCAAGTAA
mm4__chr16 32.75 Mbp_chr16_32754760 TTACTTGGGCACAGCAGCATCAACTCATTACAGGATGGAGGGGCAGAACACCCAGGGCACCCCTGGGCTCACATGGCGGT
ACAGCTGCAGGACAGAG
mm4__chr16 32.17 Mbp_chr16_32174644 CTCTGTCCTGCAGCTGTACCGCCATGTGAGCCCAGGGGTGCCCTGGGTGTTCTGCCCCTCCATCCTGTAATGAGTTGATG
CTGCTGTGCCCAAGTAA
mm4__chr14 67.78 Mbp_chr14_67780207 CAGCCAGCTAAGGGGTTGTAACTCTGAAAGGAGGATGAAGGGGAACACCACCCAGGAAAACGGTACCTGTGCTTCTAGAA
TCATGTTCATGACAGTTGATGGGTCCTCAACACAACAGCTCCTCAAGGTCTGC
mm4__chr14 101.96 Mbp_chr14_101964855 CGTGTCGGTGCTGCAGAAGCACCTGCGCAAGCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCTGGAGGAGAAGAGCGCCCTGGAGCAGATGCGCAAGTTCCT
mm4__chr1 53.74 Mbp_chr1_53739570 GGGCAGGATCCTCCCTTCTCCCGGTCGGTTTTCCCCTCCGTCAGATGGGAACGACGCTGTCTGCTAACGCGAAGCGGACA
GATGCGAAAGT
mm3__chr5 135.48 Mbp_chr5_135482445 TGAGATCTTCAGAGGCAAGGCCGGGTGGAGGGGAAGACTGCCTAGGTCAATGTGGCTGTTACTATCATCACTGTCATCAT
CTCTGCTCAGC
mm1__chr5 77.78 Mbp_chr5_77784965 CTCGTCATTGACAACGGCTCCGGCATGTGCAAGGCCAGCTTCACGGGCGACAATGCCGCCCGGGCAGTCTTCCCCTCCAT
C
GTTGGGCACCCCAGGCACCAGGGCGTGATGGTGGGCATGGGTCAGAAGGATT

Input file for Crispresso

Crispresso, written by Luca Pinello, is a software package to quantify the Cas9-induced mutations on off- or on-targets.

Click here to download an amplicon input file for Crispresso. For each off-target, it includes the off-target name, its PCR amplicon and the guide sequence. Keep a copy of this file.

After sequencing, run CRISPRessoPooled. The tool will map the reads to the amplicons and analyse the mutations:
CRISPRessoPooled -r1 Reads1.fastq.gz -r2 Reads2.fastq.gz -f crisporAmplicons_gYvicTzp9e5VPFC9YwLR.txt --name MY_EXPERIMENT

Version 4.7 - Documentation  - Contact us - Downloads/local installation - Paper - License
CRISPR/Cas9 Guide Designer for chordate vertebrate ecdysozoans lophotrochozoans protostomes spongi corals plants butterflies metazoans genomes fruitflies insects nematodes mammals.